Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00395 ATGACGACGACGACGACGACTTCAGCAACCACAACCACAGCCACCGCCACCGTCATAGTCCCTTCTTCTTCTCCTTCTCCTTCTCATATGGATTCTTCTAACTATAACAAGCCATCTTCTTCTACTTTTTATTTTTCTTGTTCAACTGTCTCTTCAGCTGCCGCTGACAGCAAGGGGCAGTCGATTCAGCAGCGGAGGCTTACGAGGCAGAGGAGACTCCGCGACCATGACGCTGCCACCGACACCTATTCCTTGCCGGCTTCTCCTCTCCCTTCTTTCAAGTCCTTCGACTCGCCTTCCATGCCTCTCCCCCTGCCACGTCCTGACTCCCCGTTGACCCGCCGTCCCGAGTCAACTAGTCCCAATTCCGGTCATCCTTTCTTTGCCACTCCGCGAAAGAGTGCGGATCATGATGCAGCTAAAAATGTAAGATCTCCAAGCAATTTGCGCAGAGCATCTTTTGATCCGACGATCCAGAGTGCAAGATATGATTTAACGGTCAATATACCATCTACAACGGTGCTATCTGGCAATATTGCATACAAAGATCCCCAAGAACACTCTCATGAGAGTTACTCTGAGACTATTTCTGAGTTGAAACTGCATTATGCTGCCAAGAGTGCCCCAACAAGCGTACTATCCAGTCCTGTTACAAGTCCGCGTAGATCCAGCAACTTAGATTTCTATGATCCTTCCCTACATTTGTTTCAAGATTTCAATGAAACTTTCAAAGTGTCACCGGCAAAAACACTTCACAGTCCAGACCTTTCTTCCCTTCGCAGCCGCAGTCCTTTCCACACTCCTAATAACATTCGAGAGGGATCTCAGCCTTATAATCTTTGCTCCAAAGAGCGGCCTGAAAGTAATGCACATCCATTACCCCTTCCGCCTAAATCTCCATCTCCATCACCGGCTCAATCAACTATCATGCATCAAACTTCTGAAATTTCACCCTCCATGAAGAAGGGTCAATGGCAGAAAGGGAAACTCATTGGCCGTGGATCATTTGGAAGTGTTTATCATGCTACCAACCTAGAAACGGGAGCATCGTGTGCAATGAAAGAGGTGGATCTGATTCATGATGATCCTAAGTCTGCTGATTCCTTAAAGCAACTAGAGCAGGAAATCAGAATTCTCCGTCAGCTACACCACCCTAACATTGTGCAGTATTATGGCAGTGAAATAGTTGGTGATCACTTGTACATATATATGGAGTATGTTCATCCTGGGTCAATTCATAAATTTATACATGAAAACTGTGGAGCTATGACTGAGTCTGTTGTTCGCAATTTCACTCGGCATATTCTCTCTGGATTGGCATACTTACATAATACAAAGACTATCCACAGGGATATCAAAGGTGCAAACTTGCTGGTTGATGCCTCGGGCATTGTCAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGAAGTCCCTACTGGATGGCTCCAGAGCTTATGATGGCTGCCATAAAGAAAGAATCAAATCCTGACATTGCCATGGCCATCGACATATGGAGCTTAGGGTGCACCATCATTGAAATGCTGACTGGCAGACCTCCTTGGAGCGAATTTGAAGGGCCTCAAGCAATGTTCAAGGTACTACACAGATCCCCACCTATACCAGAAACTCTATCCTCAGAGGGACAGGATTTCCTTAAGCAGTGTTTCAGAAGGAACCCTGCGGATCGACCAACAGCAGCAACCCTCCTTACACACGCCTTTGTACAAAATTTGCATGATCAAGATGTCCTAATTCATCCCCAACAACTCTATCATCCTAAAGGAGACCCGGGACCAAAAGAGAATACACGCAGACGCAATAGCCCAAAACACAATTCAAAATCTAGTCCCAGACACTCCATTGGCTCCAGGATTATTAACAAGATTCATAATATAATCGGTGATAAAAAATATGATAGTGATGAATGTAATCATAGTACATCTTCTGCTGACTCTCCTCACTCCCTGACAGAAGTTAACGCTCGGCAACCTCCCCTGAAACCTACACTCAATTTCATGTCTCTTGCACCATTCAAGGTTATCAAAATCATCAGACACATTTGA 2097 0.4516 MTTTTTTSATTTTATATVIVPSSSPSPSHMDSSNYNKPSSSTFYFSCSTVSSAAADSKGQSIQQRRLTRQRRLRDHDAATDTYSLPASPLPSFKSFDSPSMPLPLPRPDSPLTRRPESTSPNSGHPFFATPRKSADHDAAKNVRSPSNLRRASFDPTIQSARYDLTVNIPSTTVLSGNIAYKDPQEHSHESYSETISELKLHYAAKSAPTSVLSSPVTSPRRSSNLDFYDPSLHLFQDFNETFKVSPAKTLHSPDLSSLRSRSPFHTPNNIREGSQPYNLCSKERPESNAHPLPLPPKSPSPSPAQSTIMHQTSEISPSMKKGQWQKGKLIGRGSFGSVYHATNLETGASCAMKEVDLIHDDPKSADSLKQLEQEIRILRQLHHPNIVQYYGSEIVGDHLYIYMEYVHPGSIHKFIHENCGAMTESVVRNFTRHILSGLAYLHNTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMMAAIKKESNPDIAMAIDIWSLGCTIIEMLTGRPPWSEFEGPQAMFKVLHRSPPIPETLSSEGQDFLKQCFRRNPADRPTAATLLTHAFVQNLHDQDVLIHPQQLYHPKGDPGPKENTRRRNSPKHNSKSSPRHSIGSRIINKIHNIIGDKKYDSDECNHSTSSADSPHSLTEVNARQPPLKPTLNFMSLAPFKVIKIIRHI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00395 698 SMART serkin_6 325 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00395 698 MobiDBLite consensus disorder prediction 113 127 - -
Arst8g00395 698 MobiDBLite consensus disorder prediction 52 147 - -
Arst8g00395 698 FunFam Mitogen-activated protein kinase kinase kinase 5 322 625 - -
Arst8g00395 698 MobiDBLite consensus disorder prediction 250 323 - -
Arst8g00395 698 MobiDBLite consensus disorder prediction 1 36 - -
Arst8g00395 698 MobiDBLite consensus disorder prediction 250 283 - -
Arst8g00395 698 SUPERFAMILY Protein kinase-like (PK-like) 299 632 IPR011009 -
Arst8g00395 698 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Arst8g00395 698 MobiDBLite consensus disorder prediction 648 673 - -
Arst8g00395 698 MobiDBLite consensus disorder prediction 304 321 - -
Arst8g00395 698 Gene3D Transferase(Phosphotransferase) domain 1 321 624 - -
Arst8g00395 698 MobiDBLite consensus disorder prediction 600 636 - -
Arst8g00395 698 MobiDBLite consensus disorder prediction 656 673 - -
Arst8g00395 698 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 48 599 - -
Arst8g00395 698 ProSiteProfiles Protein kinase domain profile. 325 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00395 698 MobiDBLite consensus disorder prediction 52 66 - -
Arst8g00395 698 Pfam Protein kinase domain 326 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00395 Arst-Chr8 5751528 5756130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00395 66 588 MAP Kinase Kinase Kinase AT5G66850 45.724 2.72e-147 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst8g00395 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00395 - - gmx:100781764 776.163