Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00393 ATGACGACGACGACGACGACTTCAGCAACCACAACCACAGCCACCGCCACCGTCATAGTCCCTTCTTCTTCTCCTTCTCCTTCTCATATGGATTCTTCTAACTATAACAAGCCATCTTCTTCTACTTTTTATTTTTCTTGTTCAACTGTCTCTTCAGCTGCCGCTGACAGCAAGGGGCAGTCGATTCAGCAGCGGAGGCTTACGAGGCAGAGGAGACTCCGCGACCATGACGCTGCCACCGACACCTATTCCTTGCCGGCTTCTCCTCTCCCTTCTTTCAAGTCCTTCGACTCGCCTTCCATGCCTCTCCCCCTGCCACGTCCTGACTCCCCGTTGACCCGCCGTCCCGAGTCAACTAGTCCCAATTCCGGTCATCCTTTCTTTGCCACTCCGCGTACCAGAAAGAGTGCGGATCATGATGCAGCTAAAAATGTAAGATCTCCAAGCAATTTGCGCAGAGCATCTTTTGATCCGACGATCCAGAGTGCAAGATATGATTTAACGGTCAATATACCATCTACAACGGTGCTATCTGGCAATATTGCATACAAAGATCCCCAAGAACACTCTCATGAGAGTTACTCTGAGACTATTTCTGAGTTGAAACTGCATTATGCTGCCAAGAGTGCCCCAACAAGCGTACTATCCAGTCCTGTTACAAGTCCGCGTAGATCCAGCAACTTAGATTTCTATGATCCTTCCCTACATTTGTTTCAAGATTTCAATGAAACTTTCAAAGTGTCACCGGCAAAAACACTTCACAGTCCAGACCTTTCTTCCCTTCGCAGCCGCAGTCCTTTCCACACTCCTAATAACATTCGAGAGGGATCTCAGCCTTATAATCTTTGCTCCAAAGAGCGGCCTGAAAGTAATGCACATCCATTACCCCTTCCGCCTAAATCTCCATCTCCATCACCGGCTCAATCAACTATCATGCATCAAACTTCTGAAATTTCACCCTCCATGAAGAAGGGTCAATGGCAGAAAGGGAAACTCATTGGCCGTGGATCATTTGGAAGTGTTTATCATGCTACCAACCTAGAAACGGGAGCATCGTGTGCAATGAAAGAGGTGGATCTGATTCATGATGATCCTAAGTCTGCTGATTCCTTAAAGCAACTAGAGCAGGAAATCAGAATTCTCCGTCAGCTACACCACCCTAACATTGTGCAGTATTATGGCAGTGAAATAGTTGGTGATCACTTGTACATATATATGGAGTATGTTCATCCTGGGTCAATTCATAAATTTATACATGAAAACTGTGGAGCTATGACTGAGTCTGTTGTTCGCAATTTCACTCGGCATATTCTCTCTGGATTGGCATACTTACATAATACAAAGACTATCCACAGGGATATCAAAGGTGCAAACTTGCTGGTTGATGCCTCGGGCATTGTCAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGAAGTCCCTACTGGATGGCTCCAGAGCTTATGATGGCTGCCATAAAGAAAGAATCAAATCCTGACATTGCCATGGCCATCGACATATGGAGCTTAGGGTGCACCATCATTGAAATGCTGACTGGCAGACCTCCTTGGAGCGAATTTGAAGGGCCTCAAGCAATGTTCAAGGTACTACACAGATCCCCACCTATACCAGAAACTCTATCCTCAGAGGGACAGGATTTCCTTAAGCAGTGTTTCAGAAGGAACCCTGCGGATCGACCAACAGCAGCAACCCTCCTTACACACGCCTTTGTACAAAATTTGCATGATCAAGATGTCCTAATTCATCCCCAACAACTCTATCATCCTAAAGGAGACCCGGGACCAAAAGAGAATACACGCAGACGCAATAGCCCAAAACACAATTCAAAATCTAGTCCCAGACACTCCATTGGCTCCAGGATTATTAACAAGATTCATAATATAATCGGTGATAAAAAATATGATAGTGATGAATGTAATCATAGTACATCTTCTGCTGACTCTCCTCACTCCCTGACAGAAGTTAACGCTCGGCAACCTCCCCTGAAACCTACACTCAATTTCATGTCTCTTGCACCATTCAAGGTTATCAAAATCATCAGACACATTTGA 2103 0.4517 MTTTTTTSATTTTATATVIVPSSSPSPSHMDSSNYNKPSSSTFYFSCSTVSSAAADSKGQSIQQRRLTRQRRLRDHDAATDTYSLPASPLPSFKSFDSPSMPLPLPRPDSPLTRRPESTSPNSGHPFFATPRTRKSADHDAAKNVRSPSNLRRASFDPTIQSARYDLTVNIPSTTVLSGNIAYKDPQEHSHESYSETISELKLHYAAKSAPTSVLSSPVTSPRRSSNLDFYDPSLHLFQDFNETFKVSPAKTLHSPDLSSLRSRSPFHTPNNIREGSQPYNLCSKERPESNAHPLPLPPKSPSPSPAQSTIMHQTSEISPSMKKGQWQKGKLIGRGSFGSVYHATNLETGASCAMKEVDLIHDDPKSADSLKQLEQEIRILRQLHHPNIVQYYGSEIVGDHLYIYMEYVHPGSIHKFIHENCGAMTESVVRNFTRHILSGLAYLHNTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMMAAIKKESNPDIAMAIDIWSLGCTIIEMLTGRPPWSEFEGPQAMFKVLHRSPPIPETLSSEGQDFLKQCFRRNPADRPTAATLLTHAFVQNLHDQDVLIHPQQLYHPKGDPGPKENTRRRNSPKHNSKSSPRHSIGSRIINKIHNIIGDKKYDSDECNHSTSSADSPHSLTEVNARQPPLKPTLNFMSLAPFKVIKIIRHI 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00393 700 MobiDBLite consensus disorder prediction 650 675 - -
Arst8g00393 700 MobiDBLite consensus disorder prediction 52 149 - -
Arst8g00393 700 MobiDBLite consensus disorder prediction 252 285 - -
Arst8g00393 700 SUPERFAMILY Protein kinase-like (PK-like) 301 634 IPR011009 -
Arst8g00393 700 MobiDBLite consensus disorder prediction 1 36 - -
Arst8g00393 700 FunFam Mitogen-activated protein kinase kinase kinase 5 324 627 - -
Arst8g00393 700 SMART serkin_6 327 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00393 700 MobiDBLite consensus disorder prediction 306 323 - -
Arst8g00393 700 MobiDBLite consensus disorder prediction 602 638 - -
Arst8g00393 700 MobiDBLite consensus disorder prediction 658 675 - -
Arst8g00393 700 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 48 601 - -
Arst8g00393 700 Gene3D Transferase(Phosphotransferase) domain 1 323 626 - -
Arst8g00393 700 ProSiteProfiles Protein kinase domain profile. 327 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00393 700 MobiDBLite consensus disorder prediction 113 129 - -
Arst8g00393 700 MobiDBLite consensus disorder prediction 132 146 - -
Arst8g00393 700 MobiDBLite consensus disorder prediction 252 325 - -
Arst8g00393 700 MobiDBLite consensus disorder prediction 52 66 - -
Arst8g00393 700 Pfam Protein kinase domain 328 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00393 700 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00393 Arst-Chr8 5751528 5756130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00393 66 590 MAP Kinase Kinase Kinase AT5G66850 45.439 2.84e-147 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst8g00393 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00393 - - gmx:100781764 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00393 8 5751528 5756130 Arst8g00393 8 5751528 5756130 ECH