Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00358 ATGGAGGCGGAGGAATCCCGGTCCCAGTTACCGGGAGACGAAGCAACAGTGGTTGAGGTAACCGCTGAGCAACTGGTGGCGAGGGCCATAGCTCCCATCAAGAAGGAATTCCTTCGCCCACCACCTGTTCGCTCTTCCTCCGCAGACAACGAAGCCGCTGCCGCCGCCACCAATGATAATAAGAACCCTGCTCATCCTGGTTCGGGTCTTCTAAAGGACAAGAAGTCCAAGCGCCAGCTCAAGCGTGAACGCCGTCAGGAGCAAAAGTCGGCACGAAACCTCTGCCCGGAAGTTGCAAAGACCGGTGATGTTACTTCATGTCCTTATAAAGACAAATGCCGCTACAGCCATGATATTGAAGCCTTCAAGGCCCAGAAACCAGCTGATCTAGAAGGACAATGTCCTTTTGTTAAGTCTGGAGGGCCTTGCCCTTATGGGTTAGCATGTAGATTTTCAAGTACCCATGAAGATGGTGTTCTTTCTTCTACTGGCCATCTCAACGGTCTTAAGAACAGTTCTGAGGTTAATGGATTGAGCAAAGATGTTCAGAAGCTTCTGTGGAAAAATAAGATGAGGTTCTCCAAGGCTGATGCCAAACTCAAAAGTCTTGGCCTCTTGTGCCCCAAGTCAAAAATGAAGGACATGGAAAATAAAGATGGTGAAAATGGCGGTTCAAATAAGTGTAGCCTTTCGGATGACAATGGGTGTTGTGAAGTAGCCTCTGACTTGGGTCCTAAGTTGGAAGAAGCTATAAAGGATGATGATGCTGATGCAAAATATGAAACCGATGAACTTTGTCCACAGAAAAGAAGAAAAACTGGAGTAAATTGTGATCCTAGTGAGATAGAAAAAGGTGTGAATGTTACTGAAGAAATTGAAAGAGGCAGCATAAATACTGAACCAGAAGCAGGATGTGATACTTTAACCATAAAAACTGATCTAAGTCTGAAGTTACATCCACGTGAAAAGAAGCTTATTGATTTTAGGGACAAATTGTATCTTGCACCCTTGACCACAGTTGGAAATCTCCCTTTTAGGAGGGTTTGCAAAGTATTAGGAGCTGATGTAACATGTGGTGAGATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCTTCTGAATGGGCATTGCTGAGACGTCATTCATCTGAAGATTTATTTGGTGTACAAATCTGTGGTGCATATCCAGATACTGTGGCTCGCACTGTTGAACTAATAGAACAAGAATGTACAATAGATTTTATTGATATAAATATGGGTTGCCCTATTGACATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTGACAAAACCAATGCGGATGAAAAATATTGTTGAAGTAGCTTCAAGCACAGTGGATAAACCAATAACTATCAAGGTACGGACTGCTTATTTTGAAGGAAAGAATCGCATTGATTCTCTCATTGCAGACATGGGCTCTTGGGGAGCTGGCGCAGTAACAATACATGGAAGGTCACGTCAACAACGCTATAGCAAGCTTGCTGATTGGGATTACATATACCAGTGTGGAAGGAAGGCCCCTAATACATTGCCAGTAGTGGGGAATGGGGATGTTTTTTCGTTTGTAGACTGGAATAACCACAGAACTGCATGTCCTGAACTTGCTACCTGCATGGTTGCTCGTGGTGCTCTGATTAAACCTTGGATATTTACTGAGATCAAGGAACAGAGACATTGGGACATCAGTTCTGGTGAGCGACTAAATATTCTCAAAGAGTTTGTGCATTTTGGCCTTGAACACTGGGGATCTGACACAAAAGGAGTGGAGACGACGAGGCGGTTCTTGTTGGAATGGCTTAGCTACACTTGTAGGTACGTACCTGTTGGTCTTCTGGAAGTGATTCCACAACGAATAAACTGGCGTCCACCTTCTTACTATGGGCGAGATGAGCTTGAGACGCTGATGGCCTCAGACTCAGCAGCTGACTGGATACGCATATCAGAGATGCTACTAGGCAAGGTTCCGGATGGCTTTACATTTGCTCCAAAGCATAAATCAAATGCTTACGATAGAGCCGAAAATGGCTGA 2052 0.4459 MEAEESRSQLPGDEATVVEVTAEQLVARAIAPIKKEFLRPPPVRSSSADNEAAAAATNDNKNPAHPGSGLLKDKKSKRQLKRERRQEQKSARNLCPEVAKTGDVTSCPYKDKCRYSHDIEAFKAQKPADLEGQCPFVKSGGPCPYGLACRFSSTHEDGVLSSTGHLNGLKNSSEVNGLSKDVQKLLWKNKMRFSKADAKLKSLGLLCPKSKMKDMENKDGENGGSNKCSLSDDNGCCEVASDLGPKLEEAIKDDDADAKYETDELCPQKRRKTGVNCDPSEIEKGVNVTEEIERGSINTEPEAGCDTLTIKTDLSLKLHPREKKLIDFRDKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIEQECTIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKNIVEVASSTVDKPITIKVRTAYFEGKNRIDSLIADMGSWGAGAVTIHGRSRQQRYSKLADWDYIYQCGRKAPNTLPVVGNGDVFSFVDWNNHRTACPELATCMVARGALIKPWIFTEIKEQRHWDISSGERLNILKEFVHFGLEHWGSDTKGVETTRRFLLEWLSYTCRYVPVGLLEVIPQRINWRPPSYYGRDELETLMASDSAADWIRISEMLLGKVPDGFTFAPKHKSNAYDRAENG 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00358 683 Gene3D - 84 163 - -
Arst8g00358 683 SUPERFAMILY FMN-linked oxidoreductases 331 644 - -
Arst8g00358 683 MobiDBLite consensus disorder prediction 50 64 - -
Arst8g00358 683 Pfam Dihydrouridine synthase (Dus) 334 571 IPR035587 -
Arst8g00358 683 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 85 165 - -
Arst8g00358 683 Gene3D Aldolase class I 327 569 IPR013785 -
Arst8g00358 683 MobiDBLite consensus disorder prediction 31 94 - -
Arst8g00358 683 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 327 569 - -
Arst8g00358 683 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 21 677 - -
Arst8g00358 683 ProSiteProfiles Zinc finger C3H1-type profile. 89 120 IPR000571 GO:0046872
Arst8g00358 683 CDD DUS_like_FMN 331 566 IPR035587 -
Arst8g00358 683 ProSitePatterns Uncharacterized protein family UPF0034 signature. 415 433 IPR018517 GO:0008033|GO:0017150|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00358 Arst-Chr8 5192642 5198245 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst8g00358 Dus 1.1e-49 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00358 K05544 - gmx:100783494 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00358 8 5192642 5198245 Arst8g00358 8 5192642 5198245 ECH