Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00305 ATGATGCTATCAATGGAAGAGCTAGCGTGTGAGCTGAGTGATCATGAAAAGAGAAACGCTCAAGGTTTGCCACCCGGTTTCAGGTTTCACCCAACTGATCAAGAACTCATTACCTTCTATTTGGCTTCCAAGGTCTTCAATACTACTACTACTACTACTCATGTCAACTTTGTGGAGGTTGATCTCAATCGATGCGAGCCATGGGAACTTCCAGAAGTGGCAAAGATGGGGGAGAGAGAGTGGTATCTGTACAGTGTGAGAGACAGAAAATACCCAACGGGCCTCAGAACTAACAGAGCAACCGCTGCTGGGTACTGGAAGGCTACCGGCAAGGACAAGCAAGTATACGGCGGCGGTGGCCTTGTTGGGATGAAGAAGACGTTGGTGTTCTACAAAGGGAGGGCCCCCCGCGGTCAGAAGACTAAATGGGTAATGCATGAGTTCCGGTTGGACCCTCACAGCTCTCCTTCCCTCTCTAAGGATGAGTGGGTAATATGCAGAATATTTCATAAAAGTGGGGAAAAGAGAACTCCTACTACTACTCCTGCTCCTCTGCTACTTCATCATCAACAACACGATCCATCATCACTGTTCAATGACCATATCTCCCACTCTCATAATCATAATCAAAACCTCCTCTCGCCATTGCTTCATCCTTTCCCAATCCCTGAAGAAACCACTAAAACCAAATCATCAACAATTAACAGCAACCATTACCCTCCACCACCACCTTCCTCCCAACACTTGCTTAAGCTCAATAAGTCTACTAAATTAACAAAAACAGTGCCTCCTTCTCCATCATTCTTCCAATACCAACAGCTTCTAGAAGATGATCCCAACTTATTGCATTGGATGGACAGTGGTAATAATAATAATAATAACTGCAAGGCTAATAATACTGCTAGTAGTGTTGAGATAATGGATGCTGCTGCTGCTGGCTTGATAGCATTCTCATCAGGAGGACCTTCACCTACTCCTACTAATAATAATAATAACAATTCTGAAATAATAAGGGACATGATGATGATGTCTTCTTCTTCGGCTTCTATGCTGCACATACTCGACGATGCTCCTCTTGGAATTCAATCTTGGCCTCATCATCATCATCATCACCTTCTGTAA 1122 0.4412 MMLSMEELACELSDHEKRNAQGLPPGFRFHPTDQELITFYLASKVFNTTTTTTHVNFVEVDLNRCEPWELPEVAKMGEREWYLYSVRDRKYPTGLRTNRATAAGYWKATGKDKQVYGGGGLVGMKKTLVFYKGRAPRGQKTKWVMHEFRLDPHSSPSLSKDEWVICRIFHKSGEKRTPTTTPAPLLLHHQQHDPSSLFNDHISHSHNHNQNLLSPLLHPFPIPEETTKTKSSTINSNHYPPPPPSSQHLLKLNKSTKLTKTVPPSPSFFQYQQLLEDDPNLLHWMDSGNNNNNNCKANNTASSVEIMDAAAAGLIAFSSGGPSPTPTNNNNNNSEIIRDMMMMSSSSASMLHILDDAPLGIQSWPHHHHHHLL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00305 373 Gene3D NAC domain 32 175 IPR036093 GO:0003677|GO:0006355
Arst8g00305 373 Pfam No apical meristem (NAM) protein 24 150 IPR003441 GO:0003677|GO:0006355
Arst8g00305 373 SUPERFAMILY NAC domain 18 171 IPR036093 GO:0003677|GO:0006355
Arst8g00305 373 ProSiteProfiles NAC domain profile. 23 171 IPR003441 GO:0003677|GO:0006355
Arst8g00305 373 FunFam NAC domain-containing protein 100-like 32 175 - -
Arst8g00305 373 MobiDBLite consensus disorder prediction 206 249 - -
Arst8g00305 373 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00305 Arst-Chr8 4364720 4366194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00305 1 176 NAC Transcription Factor Family AT1G76420 71.508 9.93e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst8g00305 NAM 3.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00305 - - aip:107607453 641.343