Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00274 ATGGAGGCAGAGCAAGCCACATCAGGAGCTAACAATGGAATCGGAAGCTTATACATGAAAGTGATGACCGATGAACAACTGGAAATGCTGCGGCAACAGATATCGGTCTACGCCACCATCTGCGACCGCCTGGTTGAGATGCACAAATCTATCACCACTCAGCAAGACCTCGCAGGAATGAGGTTAGGGAATTTATACTGTGATCCTCTCATGGCGTGCTCCGGCCACAAGATAACGGCGAGGCAGCGGTGGACGCCGACGCCTCTGCAACTTCAAATTCTGGAGCGTATATTTGACGAAGGGAATGGCACTCCAAACAAGCAGAAGATCAAGGAGATAACCCTTGAGCTTGGCCAACATGGCCAGATTTCAGAGACTAATGTCTATAATTGGTTCCAGAATCGAAGAGCACGTTCCAAGCGCAAGCAACTGCTTCCCTCCCAGAATAATCTAGAAGCAGAAGCAGATGTAGAAGTAGAGTCTCCAAAGGAGAAAAAGATGCCTGAAATTCAAGAAACAATTCATCAAGTTCCTTCCTATGAGAACTTGTCCCACAGTCCTGATATAGGATTTGAACAACTGATGAGTAAACTAGAAACTGGAGGCTGCTATGGTTCTTATTTTCTTTAG 630 0.4635 MEAEQATSGANNGIGSLYMKVMTDEQLEMLRQQISVYATICDRLVEMHKSITTQQDLAGMRLGNLYCDPLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPNKQKIKEITLELGQHGQISETNVYNWFQNRRARSKRKQLLPSQNNLEAEADVEVESPKEKKMPEIQETIHQVPSYENLSHSPDIGFEQLMSKLETGGCYGSYFL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00274 209 Gene3D - 82 145 - -
Arst8g00274 209 Pfam Homeodomain 81 141 IPR001356 GO:0003677
Arst8g00274 209 SUPERFAMILY Homeodomain-like 80 143 IPR009057 -
Arst8g00274 209 ProSiteProfiles 'Homeobox' domain profile. 77 142 IPR001356 GO:0003677
Arst8g00274 209 CDD homeodomain 81 143 IPR001356 GO:0003677
Arst8g00274 209 PANTHER WUSCHEL-RELATED HOMEOBOX 13 8 192 IPR044559 GO:0003700
Arst8g00274 209 SMART HOX_1 79 146 IPR001356 GO:0003677
Arst8g00274 209 MobiDBLite consensus disorder prediction 144 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00274 Arst-Chr8 4123874 4125293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00274 17 143 Wox Gene Family AT4G35550 76.378 1.97e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst8g00274 Homeodomain 5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00274 - - pvu:PHAVU_009G012200g 322.013