Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00267 ATGGCTTCGCTTTCTCTCAACATGGTTTCAGTTCCACCAAGAACAACAACAATCTCATGCACAAGAACAAGGGTGCCTTCACTTCCTTTCTCATTCACTACTTCATGGTTTCAGGCACCGGATAAGGCTCCATTGAAAGATGGTTCAAGCATCAATCAGCTTCTTGGTATTAAAGGAGCTGCTCAAGATTCAAATAAATGGAAGATTCAAGTTCAATTTACAAAATTTGTCACTTGGCCTCCGTTGGTTTGGGGTGTAGTTTGTGGTGCCACTGCTTCTGGAAATTTCCATTGGACTATTGAGGATGTTGCTAAATCAATTGCGGGCACGTTGATGTCTGGCCCGTTTCTAACAGGATATACTCAGACTATAAATGATTGGTATGACCGAGAAATCCGAATTCCTTCTGGGGTTATATCTGAGAACGAGGTTATCACTCAAATATGGGTGCTGCTACTAGGAGGTCTTGGCTTGGCAGGTCTATTAGACGTATGGGTTGTAAAGTGGCGATGTCCAAAGCAAAGCCTATCTCCCAACCCCGATCCCGGATTTGGTTGTCCAAAGAAAAGCCTAGCTCCCAATGCTGATGCCGGTTTTGGATTTCCAAAGAAAACCATACCTCCCAAGAAAAGCCTTCCTCCTAACCCTGATACTAGTTTCCAGAAAATGGTCCTTTATTTAGAGTCTATAGGTCTAGACTCTTTCTCAGTTATCGAAAATCATCCGAAGTTGATCACTGCCTCCCTCGATGACATTAAATCTACAGTGGAATACATTATGTCCATGGACTTCACCACGATCGAGTTTCGACGCATAGTTGGCATGTGCCCGGATGTTCTGACCACCCACGTCTCGGACATCATACCCGTCTTTACCTTCCTTCTCCGCGAGGCTCATGTAAAAGGCTCGGATATTAAAAGGGTCATACATCGTCGCCCGAGGTTGCTTGTTTGCAGTGTCAATAACCAACTCCGTCCTACACTTTACTACCTCCAAAGTATTGGCATAGAAGAGGTAAGTAGGCACACTGATTTGCTATCATGTAGTGTCCAAGAAAAGCTTATACCCCGAATAGATTACTTCGAGAATATCGGGTTTTCTCGACGCGATGCAACTACCATGTTCCGAAGATTTCCTCCACTGTTTTGTTACAGTATTAAGAATAATCTGGAGCCGAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGAAGGAGTTTCCACAGTATTTCTCATTTAGCTTAGAGAACAGAATTAAGCCGAGGCATAAACGCTGCGTAGAAATGGGGGTGTGTTTCCCTCTCCCTGTGTTGTTAAAGATGACCGAAATGAGCTTTCAAAATAGGTTAGATCTATGTGTAAATTCCTCAACACCCTTGAAAAAATCTCCTCTCTGGTGTAATGCTTGTGATATTCAAGTATAG 1437 0.4328 MASLSLNMVSVPPRTTTISCTRTRVPSLPFSFTTSWFQAPDKAPLKDGSSINQLLGIKGAAQDSNKWKIQVQFTKFVTWPPLVWGVVCGATASGNFHWTIEDVAKSIAGTLMSGPFLTGYTQTINDWYDREIRIPSGVISENEVITQIWVLLLGGLGLAGLLDVWVVKWRCPKQSLSPNPDPGFGCPKKSLAPNADAGFGFPKKTIPPKKSLPPNPDTSFQKMVLYLESIGLDSFSVIENHPKLITASLDDIKSTVEYIMSMDFTTIEFRRIVGMCPDVLTTHVSDIIPVFTFLLREAHVKGSDIKRVIHRRPRLLVCSVNNQLRPTLYYLQSIGIEEVSRHTDLLSCSVQEKLIPRIDYFENIGFSRRDATTMFRRFPPLFCYSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKRCVEMGVCFPLPVLLKMTEMSFQNRLDLCVNSSTPLKKSPLWCNACDIQV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00267 478 PANTHER CHLOROPHYLL SYNTHASE 38 165 - -
Arst8g00267 478 Pfam mTERF 342 451 IPR003690 GO:0003690|GO:0006355
Arst8g00267 478 Pfam mTERF 221 297 IPR003690 GO:0003690|GO:0006355
Arst8g00267 478 Gene3D UbiA prenyltransferase 71 171 IPR044878 -
Arst8g00267 478 FunFam Transcription termination factor MTEF1, chloroplastic 294 458 - -
Arst8g00267 478 Gene3D Transcription termination factor 3, mitochondrial 285 457 IPR038538 -
Arst8g00267 478 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Arst8g00267 478 SMART mt_12 338 367 IPR003690 GO:0003690|GO:0006355
Arst8g00267 478 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Arst8g00267 478 SMART mt_12 372 404 IPR003690 GO:0003690|GO:0006355
Arst8g00267 478 SMART mt_12 306 337 IPR003690 GO:0003690|GO:0006355
Arst8g00267 478 SMART mt_12 235 265 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00267 Arst-Chr8 3871608 3876937 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst8g00267 mTERF 4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00267 K15031 - gmx:100804440 456.447