Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00259 ATGAGAGATGGTGGAGTGTTATCATCAGGTACCATGCTGGAACCTACTCCTCCTCCTCCTCCTCCTCCACTACCACCCCCACCAGCACCACCTCCAACAACAACAACATCAATATCAGTGGACTATGATTACATCAACGAACTCTTTGTAGATGGTTGCTGGTTAGCAGCTTCTTCTTCTGCTGCTGCTGCTGCTGATGGATCTGCTGATTTCTATGTGCCAAGTCCTTCTTTTTCAAACCCCATATTTGATCCATTCTCTTGGCCTTGCTTGGATACTGAACAAATTGAATCCCAAGCACGAGAACGAGAACAAGAACATGAAAAACAAGAACAACCACCACCTTTTAGCCATGACTTAGTTGTTGCTGCTAATAGTTGTAGCCGGAATCAGCAACAACAGTATCATCACTATGAGAATCAGTCAGTGGAAAACAATAATCCAAATCCTAATAATCCTTCTGAGTTTTTCAGAAGATGGTGGATTGCACCAAGTTCTAATCCGGGACCTGGATCTTATGTCGTTGAGAAGCTATTGAAGGCACTCATGTGTATCAAAGATGTGAACAGAAACAAAGACATGCTTATACAAATATGGATTCCAGTTATGAACAGAGGAGGCACTCAGATTCTCAGAACCAATGGGCTTCCATTCTCACTTGAATCAAGGTCTGTGAACCTTGCAAAGTACAGAGAAATCTCGGAGGTGTACCAGTTCTCTGCCGAGGAGGATTCGAAGGAGTTGGTGCCCGGATTGCCAGGGAGAGTTTACAAGGAGAAGGTTCCTGAGTGGACTCCTGATGTTAGATTCTTCAGGAGCTATGAATATCCAAGAGTTGACCATGCTCAAGTCTATGATGTGAGAGGATCATTGGCACTTCCAATCTTTGAGCAAGGTAGCAAGAATTGCTTAGGTGTTGTTGAAGTTGTCATGACTCAACAGAAAATCAACTATCGCCCTGAACTTGAAAGTGTTTGCCAAGCACTTGAGGCTGTTAATCTTACAAGCTCAAAACTTCCAACTATTCAGAATGTGAAGCATACATCATGTGAAAAGTCCTATGAAACTGCATTGCCTGAGATTCAAGAAGTATTAAGATCTGCATGTGAAATTCACAAATTGCCATTGGCACAGACATGGATTCCATGCATCAAACAAGGCAAAGAAGGATGCCGACACTCAGAAGACAACTATCCACACTGCATATCTCCAGTGGAGCATGCTTGCTATGTTGGTGACCCTTCAATCCAGGTCTTTCATGAGGCATGCTCTGAGCATCACTTGTTAAAAGGCCAAGGTGTTGCCGGCGGAGCATTCATGACGAATCAGCCTTGCTTCGCACCCGACATAACTTTGTTAAGCAAGACAGACTATCCACTTTCTCATCATGCAAGGATGTTTGGATTGCGCGCTGCAGTCGCCATACGCTTGCGAAGCATCTATAATAGTTCAGATGACTTTGTTCTTGAGTTCTTCTTGCCTTTGGAATGCATTGACAATGATGAACAGAAGAAGATGCTCACTTCATTGTCATTGATCATACAAAGGGTTTGCCATAGCTTGAGGGTTATATCAGATAAGGAATTGGAGGAGGAAACTGATTTTTCAGTTGAAGAAGTGATAGCTCATGAAGATAGTGGCACTTTTGCTAGTGCTGCAGCGTGGCCAGAACCACTGCAGAGTCAAATTGTTGCTTCATTGGGTGCTCAAGAAAAATCAAGTGAAACTATGGGGACGAGTTTCTCCGACCAAAGACAACAACAGCAAGAGAGTTCTGTTTTGAAAGGGAACCTTGACTCTAATGGGGAGTGTTCTACTTATAATGTCGGGAACTTGTCAAGTAAAACCGGAGACAAGAAGAAGAGCAAAGTAGATAAGACTATCACTCTGCAAGTTCTTCGCCAACACTTCGCTGGAAGCCTAAAAGATGCAGCAAAGAACATTGGTGTTTGTACTACAACGTTAAAAAGGATCTGCCGGCAACATGGGATAAAACGTTGGCCTTCAAGGAAGATCAAGAAGGTTGGTCATTCCTTGCAGAAGCTTCAACTTGTAATCGACTCAGTCCAAGGTGCTTCTGGTGCATTCCAAATAGATTCCTTCTATTCAAAATTCCCAGACTTAGCTGCTTCTCCAAATCTATCAGGAACAAGCCTGTTCTCAAATCTCAAGCAATGTGATAATAATCCAAACTCACTAAGCATACAGCCGGATCCTGGTTCGCTGAGTCCGGAAGGCGCATCAAAATCGCCGTCCTCTTCTTGCAGCCAGAGCTCGATTTCTAGCCATCCATGTTCCAGCATGGCTGAGCAACAGAATCATCATCTCACAAATAATAATTTTGATAGTAGCAAAGATCAAATGGTGTTATTGGTTGGAGAGAATTCTAGCGGCGATGGCTTGTTGAAGAGGATAAGAAGTGAAGCAGAATTGAAAAGCTTGAATGAAGATAGAGTAAAAATAGTCATGCCAAGATCGCAAAGTCAAGAAACACTTGGTCAACATAACGTTCAAAATGGGCACCATGGATCATTGTCAAGAACCAAAAGCAAAGGGACTCAAAAGGAGGATGCAGCTTATAGAGTGAAAGTAACATATGGGGATGAGAAAGCAAGGTTCAAGATGCCTAAGAATTGGGGCTATGAAGATCTTGTGCAAGAAGTTGGTAGGAGATTCTGCATAAGTGACATGAGCAAATTTGATGTCAAATATTTGGATGATGATTATGAATGGGTGCTACTAACCTGTGATGATGATTTAGAAGAATGCATTGAAGTTTGTCAATCATCTGAGAGCACCACCATCAAGCTTTGTCTTCAACTCTCTAATACTAATCATAGTATGCGAAACCCTTTAGAATTTAGATAG 2868 0.4247 MRDGGVLSSGTMLEPTPPPPPPPLPPPPAPPPTTTTSISVDYDYINELFVDGCWLAASSSAAAAADGSADFYVPSPSFSNPIFDPFSWPCLDTEQIESQAREREQEHEKQEQPPPFSHDLVVAANSCSRNQQQQYHHYENQSVENNNPNPNNPSEFFRRWWIAPSSNPGPGSYVVEKLLKALMCIKDVNRNKDMLIQIWIPVMNRGGTQILRTNGLPFSLESRSVNLAKYREISEVYQFSAEEDSKELVPGLPGRVYKEKVPEWTPDVRFFRSYEYPRVDHAQVYDVRGSLALPIFEQGSKNCLGVVEVVMTQQKINYRPELESVCQALEAVNLTSSKLPTIQNVKHTSCEKSYETALPEIQEVLRSACEIHKLPLAQTWIPCIKQGKEGCRHSEDNYPHCISPVEHACYVGDPSIQVFHEACSEHHLLKGQGVAGGAFMTNQPCFAPDITLLSKTDYPLSHHARMFGLRAAVAIRLRSIYNSSDDFVLEFFLPLECIDNDEQKKMLTSLSLIIQRVCHSLRVISDKELEEETDFSVEEVIAHEDSGTFASAAAWPEPLQSQIVASLGAQEKSSETMGTSFSDQRQQQQESSVLKGNLDSNGECSTYNVGNLSSKTGDKKKSKVDKTITLQVLRQHFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGAFQIDSFYSKFPDLAASPNLSGTSLFSNLKQCDNNPNSLSIQPDPGSLSPEGASKSPSSSCSQSSISSHPCSSMAEQQNHHLTNNNFDSSKDQMVLLVGENSSGDGLLKRIRSEAELKSLNEDRVKIVMPRSQSQETLGQHNVQNGHHGSLSRTKSKGTQKEDAAYRVKVTYGDEKARFKMPKNWGYEDLVQEVGRRFCISDMSKFDVKYLDDDYEWVLLTCDDDLEECIEVCQSSESTTIKLCLQLSNTNHSMRNPLEFR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00259 955 MobiDBLite consensus disorder prediction 1 37 - -
Arst8g00259 955 MobiDBLite consensus disorder prediction 13 34 - -
Arst8g00259 955 Pfam PB1 domain 860 940 IPR000270 GO:0005515
Arst8g00259 955 MobiDBLite consensus disorder prediction 574 599 - -
Arst8g00259 955 MobiDBLite consensus disorder prediction 826 847 - -
Arst8g00259 955 PANTHER PROTEIN NLP8 110 942 IPR045012 GO:0003700
Arst8g00259 955 SUPERFAMILY CAD & PB1 domains 853 942 - -
Arst8g00259 955 Pfam RWP-RK domain 627 675 IPR003035 -
Arst8g00259 955 Gene3D - 856 939 - -
Arst8g00259 955 ProSiteProfiles PB1 domain profile. 859 942 IPR000270 GO:0005515
Arst8g00259 955 MobiDBLite consensus disorder prediction 97 117 - -
Arst8g00259 955 MobiDBLite consensus disorder prediction 729 771 - -
Arst8g00259 955 SMART PB1_new 859 942 IPR000270 GO:0005515
Arst8g00259 955 ProSiteProfiles RWP-RK domain profile. 614 695 IPR003035 -
Arst8g00259 955 MobiDBLite consensus disorder prediction 97 114 - -
Arst8g00259 955 CDD PB1_NLP 861 940 IPR034891 -
Arst8g00259 955 MobiDBLite consensus disorder prediction 826 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00259 Arst-Chr8 3782425 3786539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00259 39 940 NLP Transcription Factor Family AT4G35270 41.249 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst8g00259 PB1 1e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00259 - - ahf:112705709 1787.31