Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00163 ATGAAGGAACAATCAGGCACGCCCCTTGCATCGTTGCCTCGGCCTCAACCTCAGGTGGAGTGGAATGAGCTTGGATATAGTTCATGGGACACTCAGACTTCTCAAAATCTTAAGAGGCCATTAGAAGCTACATTGTTGGAGAACACTTTCCTAACAAGTCCCTGCATGCCACATTATGATAATGGAACTGTTGAAATGAATATTCATTTGAAACCTCAACTTGGAAACAACACTAGATCCCGTTTATGGATTCCTCAGCAAGAAGAATCTGTTGCTAAGAGAGCTCTCTTACAACAGATGAACGCAACGCTGCCTAAGGTTAACAGAAAAGGTCATCTTGCAGGTTCAGGTTCAGGTTCAGTTAGCATAATACCACAGAATGATCAACATTTTCTAACTGAACTAGATCAACATTCTTTTGAAATTGATAATCATTTGTCTCCTGACATTTCTAAATTAGAATCTGAGGTGTTAAGTGATCCTGTTAACCCTCAAAGTCAAAATTGGAGTTCATCAGTGGTTGGTATTCCCCAATCTGATTCTGCCACTGTGAATGGCCTAATTCCTCAGCAAGATACAGATGAATGGATGGTGCATTCTTCTTGCCAACAAGGATTGCAAGAACATCGTATATTAAGATCTGAAGCAGTTTTGAGGAATCTCTCAGCTAAGAGCAACAATCCTGGTGAAATTTGGGGTAACACCAGTGTTGATGTTAGCAGTGCAAGTGCCACCATGGTTGAGCCTTCGAATTCAAGTGCCATTTTGGATGAATTTTGCACACTTCAGGACAAGGATTTTCAGAAACTATCAGATTGCATCGTGAGCAACTTCAGTATGAGCCAGGATGTCCAGTCACAGATAACATCAGCAAGTCTAGCTGAGTCCCATGTGTTTTTTGTGCAAGACCTCGCCATCGACGCAGGTGGTGCATCTTCAAGCCATGCTGATTTTAATGAATGCAGCTTTCTGCAAAATAATTCAAGGCCGCGAGTAGCTTCGAAAGCTCCACCCAGGCGTACCTATACTAAGGTACAAAGGGCTGGTTCTGTAGGAAGATCAATTGATGTCACTGCTTTCAAGAACTATGAGGAACTGATACATGCAATTGAATCCATGTTCGGACTCGAGGGTCTGCTTAATGACGACACCAGAGACAGAGATTCAGAATGGAAGTTAGTATATGTTGATTACGAGAATGATGTTCTACTTGTTGGGGATGATCCTTGGGGGGAATTTGTGAACTGCGTCCGCTGCATCAGAATTTTGTCACCTACAGAGCTTAAGAAGATGAGCAAAGAGGGAATGCAGCTTCTAAATAGTGGTGCATTGCAACGGATCAATGGTCACATGCACTAA 1359 0.4253 MKEQSGTPLASLPRPQPQVEWNELGYSSWDTQTSQNLKRPLEATLLENTFLTSPCMPHYDNGTVEMNIHLKPQLGNNTRSRLWIPQQEESVAKRALLQQMNATLPKVNRKGHLAGSGSGSVSIIPQNDQHFLTELDQHSFEIDNHLSPDISKLESEVLSDPVNPQSQNWSSSVVGIPQSDSATVNGLIPQQDTDEWMVHSSCQQGLQEHRILRSEAVLRNLSAKSNNPGEIWGNTSVDVSSASATMVEPSNSSAILDEFCTLQDKDFQKLSDCIVSNFSMSQDVQSQITSASLAESHVFFVQDLAIDAGGASSSHADFNECSFLQNNSRPRVASKAPPRRTYTKVQRAGSVGRSIDVTAFKNYEELIHAIESMFGLEGLLNDDTRDRDSEWKLVYVDYENDVLLVGDDPWGEFVNCVRCIRILSPTELKKMSKEGMQLLNSGALQRINGHMH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00163 452 Gene3D - 337 432 - -
Arst8g00163 452 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 20 433 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst8g00163 452 Pfam AUX/IAA family 334 429 IPR033389 -
Arst8g00163 452 SUPERFAMILY CAD & PB1 domains 353 422 - -
Arst8g00163 452 FunFam Auxin response factor 335 432 - -
Arst8g00163 452 ProSiteProfiles PB1 domain profile. 340 427 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00163 Arst-Chr8 2144351 2146429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00163 241 444 B3 DNA Binding Superfamily AT1G19850 59.524 1.88e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Arst8g00163 AUX_IAA 1.5e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00163 K14486 - adu:107460158 911.753