Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00152 ATGGCCGGAGAGAATAGCAAGAACGACGTCGCAGTGTATCCTCCCAAAACAAGACGGTTGTGGCCTTCTCTTCTCCGTTGGATTCCGACTTCAACGGAACACATCATCGCTGCCGAGAAGCGACTCCTTTCTCTCGTCAAGACTCCCTTTGTTCAAGAACATGTTAATATTGGCTCTGGTCCTCCTGGCTCTAAAGTTAGATGGTTCCGTTCATCAAGCGACGAGCCACGGTTTCTTAACACTATTACGTTTGATAGTAAAGATGACTCCCCTACGCTTGTAATGGTCCATGGATATGCAGCTTCCCAGGGTTTCTTTTTTCGCAATTTCGATGCTCTTGCAAATCATTTCAGAGTCATTGCTGTTGATCAACTTGGCTGGGGTGGATCAAGCAGACCTGATTTTACATGTAGGAGCACTGAAGAAACTGAGACATGGTTCATAGATTCTTTTGAAGAATGGAGGAAAGCCAAAAATCTGAGCAATTTTATACTGCTTGGACATTCTTTTGGTGGTTATGTTGCTGCCAAATATGCACTCAAGCACCCTGAGCATGTAAAGCAATTGATTCTGGTGGGACCCGCTGGATTTACATCAGAATCAGATCCAAAGGCTGAGTTCATTATGAAGTTTCGAGCAACGTGGAAAGGAGCAGTTATGAACCATCTATGGGAATCTAATTTTACGCCTCTAAAAATTGTCAGAGGTTTAGGTCCTTGGGGTCCTAATATGGTCCGTCGATATACAGATATGAGGTTTGGTACGCGCGCACAAGGGGAAATACTGACTGAAGAGGAATCAAGATTGCTCACAGATTATATGTACCATGTATCAGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAGTACATTTTTAAATTTGGTGCATTTCCTAGGATCCCCCTCTTTCACAGTGCCTCAGAGTGGAAAGTACCCACCACATTCATATATGGTTTTGACGACTGGATGAATTATGAAGGGGCCCAAGAAGCTCGCAAGGATATGAAGGTTCCATGTGAAATCATTAGGGTCCCCCAGGGAGGGCACTTTGTGTTCATTGACAACCCAAGTGGTTTCCATTCTGCTGTGCTTTATGCTTGTCGAAAATTTCTTAGACCTAATACAGACAATGAATCTCTTCCTGAAGGGCTAACCTCTGCATAG 1164 0.4433 MAGENSKNDVAVYPPKTRRLWPSLLRWIPTSTEHIIAAEKRLLSLVKTPFVQEHVNIGSGPPGSKVRWFRSSSDEPRFLNTITFDSKDDSPTLVMVHGYAASQGFFFRNFDALANHFRVIAVDQLGWGGSSRPDFTCRSTEETETWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVKQLILVGPAGFTSESDPKAEFIMKFRATWKGAVMNHLWESNFTPLKIVRGLGPWGPNMVRRYTDMRFGTRAQGEILTEEESRLLTDYMYHVSAAKASGELCLKYIFKFGAFPRIPLFHSASEWKVPTTFIYGFDDWMNYEGAQEARKDMKVPCEIIRVPQGGHFVFIDNPSGFHSAVLYACRKFLRPNTDNESLPEGLTSA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00152 387 PANTHER RE40534P-RELATED 26 365 - -
Arst8g00152 387 Pfam alpha/beta hydrolase fold 91 356 IPR000073 -
Arst8g00152 387 PRINTS Alpha/beta hydrolase fold signature 116 131 IPR000073 -
Arst8g00152 387 PRINTS Alpha/beta hydrolase fold signature 165 178 IPR000073 -
Arst8g00152 387 PRINTS Alpha/beta hydrolase fold signature 179 192 IPR000073 -
Arst8g00152 387 PRINTS Epoxide hydrolase signature 344 366 IPR000639 GO:0003824
Arst8g00152 387 PRINTS Epoxide hydrolase signature 179 192 IPR000639 GO:0003824
Arst8g00152 387 PRINTS Epoxide hydrolase signature 116 131 IPR000639 GO:0003824
Arst8g00152 387 PRINTS Epoxide hydrolase signature 311 327 IPR000639 GO:0003824
Arst8g00152 387 Gene3D alpha/beta hydrolase 78 368 IPR029058 -
Arst8g00152 387 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 77 367 - -
Arst8g00152 387 SUPERFAMILY alpha/beta-Hydrolases 82 364 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00152 Arst-Chr8 1872320 1875651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00152 71 198 Acyl Lipid Metabolism Gene Families AT1G64670 30.657 7.25e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00152 - - nnu:104607503 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00152 8 1872320 1875651 Arst8g00152 8 1872320 1875651 ECH
Arst6g01641 6 16920262 16924268 Arst8g00152 8 1872320 1875651 PCT