Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00148 ATGGACAAGGTTCCTCTTCTTATTCTTACTTTGGCATTGGCGTTTATGTGCTTCAAATGTGAGAGTGCACCACAAAATGATACACACGCACTCACCCAATTCCGCCTCCAAACCGACGCACACGCCTCTCTCCTAACAAACTGGACAGGCGCCGATGCTTGCGCCGCGGCCTCCACTTGGCGCGGCGTCGAGTGCTCCCCAAACGGCAGAGTGGTGGCACTCTCCCTCCCTTCCCTCAATCTCCGAGGCCCCATCCATTCCCTTTCATTACTTTCCTACCTCCGATTCCTTGATCTCCACGACAATCGCCTAAACGGCACCGTTTCCACTCTTTGCAACTGCACCGACCTCGAACTCCTCTATCTCTCCGGAAACGACTTTTCCGGCGAGGTTCCTCTGGAGATTTCCTCCCTCAGGCTCCTCGTGAGGCTTGACATCTCCGATAACAACCTCCGAGGACCGGTTCCCAAGGAAATTTCAAGTTTAACTCACCTCCTCACGCTCCGCCTCCAGAACAACGCTCTTTCCGGCGAAGTCCCCGATTTCTCTTCTTCCCTCGTTAACCTCAAGGAGCTCAACATAACCAATAACGAACTCGTCGGACACTTACCGAATTCCATGCTCAACAGGTTTGGTATTGCAAGCTTCGCTGGGAATGGCGCACTTTGTGGTGATTCACCACTGCCAAAATGTTCCTCCACCGAGACTCCTTCTCCTTCGTCCTCTTCTGATAACAAAACTGGTCCTTCAAACCCGAGCGTCATACCGAAAACGAGTAGCGTAGTCGCAGTTCCGAAGAACCCACCATCACGGAAAGGTTTAAGTCCGGGGGTGATCGTGGCAATTGTAGTGGCGGTTTGCGTGGTGTTTCTTGTGGTTGTCTCTTTCACCGTGGCGCACTGCTGCACCGGTGGGAGAACCTCAAACTCAATGGTTGGGAGTGAAAGCGGCAAGAGGAAGAGTGAGAGCAGCTACGGGGTGTACGCTAGTGGCAGCGGGGCAGAAAGGGACAGTGATGGAACGGTGGACACTGAGCGGAGCAGGCTGGTGTTCTTCGACAGGAGAAGCCAGTTTGAGCTGGAGGATCTGCTTCGCGCATCGGCAGAGATGCTCGGGAAGGGGAGCTTGGGGACTGTGTATAGGGCGGTGCTGGATGACGGGTGCACGGTGGCGGTGAAGAGGCTGAAGGATGCGAACCCTTGTGAGAGGAGCGAGTTTGAGCAGTACATGGATGTTGTGGGGAAGATGAAGCACCCAAACATTGCGAGGCTCATAGCGTTTTACTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTTCCCAATGGAAGCTTGCATACACTTCTTCATGGGAACCGTGGAGCAGGAAGAATCCCATTAGATTGGACGACAAGAATAAGCCTGGTGTTAGGAGCAGCCAGAGGACTAGCTCGCATTCATGCAGAGTACAGTGCTGCCAAGATCCCTCACGGCAACATCAAATCTTCCAACGTCCTTCTCGACAAGAACGGCGCTGCATGCATCTCCGACTTCGGCCTCTTCCTCCTCCTTAATCCCGTCCACGCCATAGCCAAGTTGGGCGGTTACAAAGCACCGGAGCAATCAGAACACAAGAAACTTTCCCAGCAAGCCGATGTCTACAGCTTCGGCGTCTTGATCTTGGAGGTTCTAACTGGCAAAGCACCGTCTCATCAGCATCCTTCCATGCCGCGACCTCGGACGGAGTTGGAGGAACCACACTTGGATCTTCCCAAATGGGTTCGTTCCCTTGTGAAGGATAGTGAGGAGTGGAACGCGGAGGTGTTTGATCAGGAACTGCTGAGGTACAAGAACATTGAGGATGAGCTTCTCGCCATGATGAATGTGGGGTTGGTTTGTACGGAATTGGAGCCTGAGAAGAGGCCAACTACGTTGGAAGTTGTGAAGATGATTGAGGATATCAGGGTGGAACAATCGCCTCTTGTGGAGGATTTTGATGAGTCGCGCAATTCGCTTTCGCCTTCCATTCCCACCACTGAAGATGGCATGGCCTAG 2037 0.5287 MDKVPLLILTLALAFMCFKCESAPQNDTHALTQFRLQTDAHASLLTNWTGADACAAASTWRGVECSPNGRVVALSLPSLNLRGPIHSLSLLSYLRFLDLHDNRLNGTVSTLCNCTDLELLYLSGNDFSGEVPLEISSLRLLVRLDISDNNLRGPVPKEISSLTHLLTLRLQNNALSGEVPDFSSSLVNLKELNITNNELVGHLPNSMLNRFGIASFAGNGALCGDSPLPKCSSTETPSPSSSSDNKTGPSNPSVIPKTSSVVAVPKNPPSRKGLSPGVIVAIVVAVCVVFLVVVSFTVAHCCTGGRTSNSMVGSESGKRKSESSYGVYASGSGAERDSDGTVDTERSRLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCERSEFEQYMDVVGKMKHPNIARLIAFYYAKEEKLLVYDYLPNGSLHTLLHGNRGAGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVLLDKNGAACISDFGLFLLLNPVHAIAKLGGYKAPEQSEHKKLSQQADVYSFGVLILEVLTGKAPSHQHPSMPRPRTELEEPHLDLPKWVRSLVKDSEEWNAEVFDQELLRYKNIEDELLAMMNVGLVCTELEPEKRPTTLEVVKMIEDIRVEQSPLVEDFDESRNSLSPSIPTTEDGMA 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00148 678 Gene3D Phosphorylase Kinase; domain 1 335 440 - -
Arst8g00148 678 Gene3D Ribonuclease Inhibitor 24 112 IPR032675 -
Arst8g00148 678 Gene3D Ribonuclease Inhibitor 113 233 IPR032675 -
Arst8g00148 678 MobiDBLite consensus disorder prediction 230 272 - -
Arst8g00148 678 MobiDBLite consensus disorder prediction 308 341 - -
Arst8g00148 678 Pfam Protein kinase domain 369 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00148 678 ProSiteProfiles Protein kinase domain profile. 365 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00148 678 FunFam Nuclear pore complex protein NUP107 24 181 - -
Arst8g00148 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 651 IPR046959 -
Arst8g00148 678 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Arst8g00148 678 Gene3D Transferase(Phosphotransferase) domain 1 441 666 - -
Arst8g00148 678 FunFam pollen receptor-like kinase 1 335 440 - -
Arst8g00148 678 MobiDBLite consensus disorder prediction 230 265 - -
Arst8g00148 678 SUPERFAMILY L domain-like 25 209 - -
Arst8g00148 678 MobiDBLite consensus disorder prediction 657 678 - -
Arst8g00148 678 SUPERFAMILY Protein kinase-like (PK-like) 369 645 IPR011009 -
Arst8g00148 678 MobiDBLite consensus disorder prediction 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00148 Arst-Chr8 1731560 1734498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00148 25 674 Receptor kinase-like Gene Family AT2G36570 63.378 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst8g00148 Pkinase 1.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00148 - - gmx:100808402 918.687