Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00139 ATGGATCTGCTACGATCGGAGCCTATGCAGCTAGTTCAGTTGATCATTCCCATCGAAGCAGCTCATCGATCCATCTCTTACCTCGGTGATCTCGGCCTCGTTCAATTCAAAGATCTCAATGCAGATAAAAGCCCGTTCCAACGGACATATGCTACTCAGATTAAAAGGTGCGGGGAAATGGCTCGCACGCTACGGTTATTTAAGGAACAAATGATAAAGGCGGGTGTATCTCCCTCGATGCAGAATACCAGAAATAGTGTTATTGATCTGGATCATTTGGAGGTTAAACTTAAAGAACTTGAAGCTGATCTGCTTGAGAACAAGGCAAATAATGAGAAGTTGCAACACACCTACAACGAGCTGGTAGAATATAAGCTTGTTTTGGAGAAGGTTGGTGAATTTTTCTCTTCAGCACAAAACAGTGCTGTAGCTCAGCAGAGGGAGCATGATGTCCAAACAACTGTTAAAGGGTCGATTGACAGCCCATTATTACTAGAACAAGAGACAACAGCGTTTTCGGCTAAGCAGGTTAAGCTGGGTTTTATCAGTGGTCTTGTTCCGAGAGAAAAATCAATTCCTTTTGAAAGAATCTTGTTTCGTGCTACAAGGGGGAACGTATTTATGAAGCAAGCCGTGATTGATAAACCTGTGCTCGATCCAATATCAGGAGAGAAGGTTGATAAAAATGTATTTGTTGTATTTTATTCTGGGGAGAGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGCTATCCTTTCTCAGATGACCTGGGGAAACAATTTCAGATGATAAGAGAGGTGTCAGGGAAACTTTCAGAGTTGAAGACTACCATCGATGTAGGATTGCTTCATTGGAGCACTTTACTCCAGTCTATTGGACATCAGTATGAGCAGTGGAGCCTTCTGTTGAGGAGGGAAAAAGCCGTTTATCACACCCTAAATATGCTTAGCTTTAATGTGACGAGAAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGTCAGATTCAGAAAGTATTGCAGCGGGCAACTAGGGATTGTAACTCCCAGGTTGGAGCCATATTTCAGATTCTCCAGACAAAGGAATCACCACCGACCTATTTTTACACAAACAAATTTACTTCTTCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAGTACCAGGAGGCAAATCCCGGTGTATACACAATCATCACCTTTCCGTTCCTTTTCGCTGTCATGTTTGGTGACTGGGGCCATGGCATATGCATATTGCTGGCTTCTTTGTACCTCATAATTAGAGAGAAAAAGTATTCGAGTCAGAAACTTGGAGACATCATGCAAATGGCATTTGGCGGACGCTATGTTATTGCGATGATGGCAATCTTCTCAATCTACACTGGCTTCATATACAATGAATTCTTCTCTGTTCCGTTTGCTATATTTGCACCATCTGCCTATGCATGCCGTGATCCATCATGCAGGGATGCTTCTACAACAGGTTTAATAAAAGTGCGAAACACCTACCCATTTGGTCTGGATCCTGTATGGCATGGCACTCGGAGTGAACTTCCATTTCTTAACTCTTTGAAGATGAAGATGTCTATTTTACTAGGAGTATGCCAGATGAATCTTGGAATCATATTGAGTTATTTTAATGCAAAATACTTTGGAAGCAGCATAGATGTTTGGCACCAATTTGTTCCCCAGATGATATTCTTAAATAGCCTATTCGGCTACCTTTCGCTCATCATAATTGTTAAATGGTTTACTGGATCACAGGCTGACTTATATCATGTGATGATATACATGTTCTTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTTGGCCAGAAGTTTCTTCAACTTGGATTATTGTTGTCAGCACTTGTAGCTGTACCATGGATGTTATTACCAAAGCCCTTTCTTCTGAAGAAACAACACGAAGAAAGGCATCAAGGTCAATCTTACTCTCTGGTCCACAGTACGGATGATCCTATTGAATCAGGGCCACATAGCCCTCACGGCCATGAGGGGTTTGAGTTCAGTGAAGTTTTCGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGTGCTGTGTCTAATACAGCTTCATATCTACGTCTATGGGCCCTCAGTCTGGCTCATTCAGAGTTGTCGAGTGTCTTCTATGACAAAGTTCTACTTATGGCCTGGGAGTTTAATAATACCGTTATTCTTATTGTTGGCGTTATTGTTTTCATATGTGCAACTGTTGGTGTATTACTGCTTATGGAAACTCTAAGCGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTTCAGAATAAATTTTATGTGGGAGATGGTTACAAGTTTGCCCCATTTTCATTTGCGTTACTTAGTGATGAGGATGAACTGTAG 2427 0.412 MDLLRSEPMQLVQLIIPIEAAHRSISYLGDLGLVQFKDLNADKSPFQRTYATQIKRCGEMARTLRLFKEQMIKAGVSPSMQNTRNSVIDLDHLEVKLKELEADLLENKANNEKLQHTYNELVEYKLVLEKVGEFFSSAQNSAVAQQREHDVQTTVKGSIDSPLLLEQETTAFSAKQVKLGFISGLVPREKSIPFERILFRATRGNVFMKQAVIDKPVLDPISGEKVDKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLGKQFQMIREVSGKLSELKTTIDVGLLHWSTLLQSIGHQYEQWSLLLRREKAVYHTLNMLSFNVTRKCLLAEGWCPVFATSQIQKVLQRATRDCNSQVGAIFQILQTKESPPTYFYTNKFTSSFQEIVDAYGVAKYQEANPGVYTIITFPFLFAVMFGDWGHGICILLASLYLIIREKKYSSQKLGDIMQMAFGGRYVIAMMAIFSIYTGFIYNEFFSVPFAIFAPSAYACRDPSCRDASTTGLIKVRNTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVCQMNLGIILSYFNAKYFGSSIDVWHQFVPQMIFLNSLFGYLSLIIIVKWFTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFLQLGLLLSALVAVPWMLLPKPFLLKKQHEERHQGQSYSLVHSTDDPIESGPHSPHGHEGFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLMAWEFNNTVILIVGVIVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYVGDGYKFAPFSFALLSDEDEL 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00139 808 PIRSF ATP6V0A1 1 808 IPR026028 GO:0000220|GO:0046961
Arst8g00139 808 PANTHER VACUOLAR PROTON ATPASES 3 805 IPR002490 GO:0033179|GO:0046961|GO:1902600
Arst8g00139 808 PANTHER VACUOLAR PROTON ATPASES 3 805 IPR002490 GO:0033179|GO:0046961|GO:1902600
Arst8g00139 808 Coils Coil 90 117 - -
Arst8g00139 808 Pfam V-type ATPase 116kDa subunit family 27 799 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00139 Arst-Chr8 1553403 1560580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00139 1 807 Primary Pumps ATPases(2) AT4G39080 74.660 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00139 K02154 - gmx:100805813 1356.27