Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00109 ATGAAAACCCGTCGGGTCCTCATCCAAACTCCCCCTCTTCCATTTCCATCCATAAAATCTTACCTTCTTCTTCTGCCACAAACACGCCGCCACTCATCCCTCTTCTCAACCACCTCCACTTCCGGTGACCACCACTCTTTCACTGTCTCCTACCTCACCACCAAGTGCGGCTTCTCCCATGAAGACGCTCTCAGAGCAAACAGGCGCGTTCGCTTTGACACCCCGGTCAAGCCAGATTCCGTCATCTCCTTCTTCAAAGCCCACGGTTTCTCACTCTCCCAAATCACCACCATCATGCGCAGGATTCCCGTGTTCCTCACATGCGACCCCACCAATGCAATCTTGTCAAAGTTTCAATTTTTATCATCCAAAGGTGCTTCTCCCTCTGACATTGTACTCATGACCACAAGGAGTCCTCGCTTCCTGCTTCGAAGCCTTGACCATATAGTATCCTTGTACGAATTGGTAAGGAGGTTCTGTCCCTCTGATCTTAAGGCCATTGCTTATATAACTGCATGGCCATCATCCATTGCTGATGTTCGTCTGGCTCAAAATGTGAAATTGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTGTGCTGTCCTCTGCTGATTTGAAGAAAACAGTTGAGGAAGTGAAGCAATTGGGGTTTGATCCTTCACACTCTTATTTCAGTGTGGTGTTGCTGACCAAAAGGGCCATAACTAAGTCCAAATGGGAGGCTAAAGTTGATGTCCTTAAGAAATGGGGCTGGTCCGAACAAGATTTTTCGGAGGCCTTTAGGAGGCACCCCAATTTTATGCTACGTTCCGAGGACAAACTCAATGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCGCTTCGCATTAGACCGATGCTTTTTGGATGCAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTGTCAAATATCTTCTCTCCAATGGTTTGATGAAGAAGAATGCTAGCATAATCACACCATTTTCTTTGACTGAGGAGCTGTTCCTCAAGAAGTGTGTCACATGTTTTGAGGAGAAAGATCGGTCTCGCCTATTAACACTATATCAAGGAGGATGTTAG 1125 0.4667 MKTRRVLIQTPPLPFPSIKSYLLLLPQTRRHSSLFSTTSTSGDHHSFTVSYLTTKCGFSHEDALRANRRVRFDTPVKPDSVISFFKAHGFSLSQITTIMRRIPVFLTCDPTNAILSKFQFLSSKGASPSDIVLMTTRSPRFLLRSLDHIVSLYELVRRFCPSDLKAIAYITAWPSSIADVRLAQNVKLLLDEGLTNANIHHLLRTRPSVLSSADLKKTVEEVKQLGFDPSHSYFSVVLLTKRAITKSKWEAKVDVLKKWGWSEQDFSEAFRRHPNFMLRSEDKLNAVMSFWISNLGWDSSALRIRPMLFGCSLEKRLIPRAKVVKYLLSNGLMKKNASIITPFSLTEELFLKKCVTCFEEKDRSRLLTLYQGGC 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00109 374 Gene3D Transcription termination factor 3, mitochondrial 174 361 IPR038538 -
Arst8g00109 374 Gene3D Transcription termination factor 3, mitochondrial 59 173 IPR038538 -
Arst8g00109 374 PANTHER CGI-12 PROTEIN-RELATED 44 358 IPR003690 GO:0003690|GO:0006355
Arst8g00109 374 Pfam mTERF 182 350 IPR003690 GO:0003690|GO:0006355
Arst8g00109 374 Pfam mTERF 82 228 IPR003690 GO:0003690|GO:0006355
Arst8g00109 374 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Arst8g00109 374 SMART mt_12 200 228 IPR003690 GO:0003690|GO:0006355
Arst8g00109 374 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Arst8g00109 374 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Arst8g00109 374 FunFam Mitochondrial transcription termination factor-like 146 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00109 Arst-Chr8 1278509 1279847 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst8g00109 mTERF 6.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00109 K15031 - gmx:102666739 329.331