Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00103 ATGAGACAAGCTTGGAGGCCTCAGAGGGGTCTCCCCGAAACCTCTGTCTCAATACTTCGCGCTTGGCTTTTCGAGCATTTTCTTCACCCGTATCCCAAGGATTCAGAGAAAATCATGCTGGCAAGACAGACAGGCCTGACCAGAAACCAGGTGGCAAATTGGTTCATCAATGCACGGGTGCGGCTATGGAAGCCGATGGTTGAAGAAATGTATAAAGAAGAGTTTGGTGATTCTGATAACATAAGCTGCAATATTCCATCCGAAGGCATTGTGAAACGTAAAAGAGATGATGCTGAAGCCTCTGATAACAAAGGGGAAGATGATTCACAAGACAATTTAGTAACCATTGCTGATAGTGTCCAACAAGAAGGGCATTTTCATAAACATACATCATGTTCCGTGGATGAGAACAACAATAATGGGGTTTATAGTTGTGGAAGCATAATGGGTTGTAGCACTAGTCCTGCTGCATATGATTTTGCAGAGTTGGGTAACTTTACATCTACCATGGGTGGCCACGTGTCTCTTGCATTGGAATTGAGGAACTGTGAAAGGGATGGGTTTGGTGGCATGTCTGATAATGATGGCATCCACAAGAAAAGACGTAATCATTGTGTAGATATATTTCTCACTTTGTAA 639 0.4319 MRQAWRPQRGLPETSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSDNISCNIPSEGIVKRKRDDAEASDNKGEDDSQDNLVTIADSVQQEGHFHKHTSCSVDENNNNGVYSCGSIMGCSTSPAAYDFAELGNFTSTMGGHVSLALELRNCERDGFGGMSDNDGIHKKRRNHCVDIFLTL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00103 212 ProSiteProfiles 'Homeobox' domain profile. 2 65 IPR001356 GO:0003677
Arst8g00103 212 Pfam Homeobox KN domain 22 61 IPR008422 GO:0003677|GO:0006355
Arst8g00103 212 Gene3D - 2 80 - -
Arst8g00103 212 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 105 - -
Arst8g00103 212 CDD homeodomain 5 66 IPR001356 GO:0003677
Arst8g00103 212 SMART HOX_1 5 69 IPR001356 GO:0003677
Arst8g00103 212 SUPERFAMILY Homeodomain-like 6 73 IPR009057 -
Arst8g00103 212 MobiDBLite consensus disorder prediction 92 111 - -
Arst8g00103 212 FunFam BEL1-like homeodomain protein 4 8 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00103 Arst-Chr8 1140135 1141268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00103 1 88 Homeobox Transcription Factor Family AT1G19700 78.409 7.11e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Arst8g00103 Homeobox_KN 4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00103 - - adu:110272495 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00103 8 1140135 1141268 Arst8g00103 8 1140135 1141268 ECH