Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03322 ATGGGTGCTCCTAAGCAGAAATGGACATCTGAAGAGGAAGCAGCTCTTAAAGCTGGAGTTGTCAAGCATGGGGTTGGTAAATGGCGTACAATACTCAAGGATCCAGAATTTAGTGGTGTTTTGTATCTGCGGTCCAATGTGGATCTCAAGGATAAATGGAGAAATCTGAGTGTGATGGCAAATGGATGGAGTTCTAGGGAAAAGTCTAGGTTGGCTATCAGAAGGGTGCATCAAGCCCCAAAACATGACGAGAACCCTTTTGCTGTCGCTCCTTTTACTCCAAGTGATGAAGATATTGTTGATGTTAAGCCTATTCAAGCTTCCAGAGATGTGGTGCCATTTTCTGGTCCAAAAAGGTCTATTGTAAGATTGGATAACCTTATAATGGAGGCAATAACTACCTTGAAGGAAACTGGTGGTTCTAATAAGACAACTATTGCAGCTTTCATAGAGGTATTATTCTTATTTTGA 471 0.414 MGAPKQKWTSEEEAALKAGVVKHGVGKWRTILKDPEFSGVLYLRSNVDLKDKWRNLSVMANGWSSREKSRLAIRRVHQAPKHDENPFAVAPFTPSDEDIVDVKPIQASRDVVPFSGPKRSIVRLDNLIMEAITTLKETGGSNKTTIAAFIEVLFLF 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03322 156 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Arst7g03322 156 FunFam Telomere repeat-binding factor 1 8 86 - -
Arst7g03322 156 PANTHER SINGLE MYB HISTONE 4 1 151 IPR044597 GO:0003691
Arst7g03322 156 SUPERFAMILY Homeodomain-like 2 71 IPR009057 -
Arst7g03322 156 Gene3D - 2 59 - -
Arst7g03322 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Arst7g03322 156 SMART sant 4 59 IPR001005 -
Arst7g03322 156 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Arst7g03322 156 FunFam Telomere repeat-binding factor 1 2 58 - -
Arst7g03322 156 SUPERFAMILY "Winged helix" DNA-binding domain 117 151 IPR036390 -
Arst7g03322 156 CDD SANT_TRF 6 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03322 Arst-Chr7 78645710 78647227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03322 1 151 Single Myb Histone (SMH) Gene Family AT1G49950 68.212 3.05e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst7g03322 Myb_DNA-binding 5.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03322 K09422 - gmx:100780698 256.914