Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03303 ATGGTTGGCAGGGGTGGTTCGGGGACTGGCTCTGGGTGTGGCTCTGCCTCTGGCTCTGCCTCTGGGTCTGTGCAGCCACAATTCATTGCGAGCACTGGCTCCAATACGAATACGCCCCTCATTGACAACTCAGATGTTGATCAAGTTGTTGTGCCTGATACCAGAAGCTGGAAAAATCTATTTTCTTACATGGGGCCTGGCTTTCTTGTTTCCATTGCATACATAGACCCGGGAAACTTTGAGACAGATCTTCAGTCGGGGGCTCAACATAAATACGAGCTACTTTGGATCATATTGGTGGCATCCTGCGCTGCTCTATTAATTCAATCCATGGCAGCCAATCTTGGGGTCGTCACTGGAAAGCACTTAGCAGAGCATTGTAGAAATGAATATGCTTGGGCTACCAACTTTATTCTTTGGTTTATTGCTGAAATTGCCATAGTCGCCTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTTTTCAGCATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGATCCTCTTAGCTTTGCAGCAATATGGGGTTAGAAAACTTGAATTCTTGATTGCATTTCTAGTATTTACAATTGCTGCATGCTTTTTTGCTGAGCTTGGATATGCAAAACCTGTTGCTAAAGAAGTTCTGAAGGGTCTTTTTGTGCCAGAACTAAAAGGAAGCGGTGCTACTGGTCTCGCGATTTCACTCCTAGGGGCTATGGTTATGCCTCACAATCTCTTCCTGCACTCAGCTCTGGTACTTTCTAGGAAAATACCACGATCAGTTCGGGGGATCAAAGAGGCCTGTAGATTTTACTTGATAGAAAGTGCCTTTGCTCTTATGGTAGCCTTCCTCATAAACGTTTCTGTTATCTCTGTGAGCGGTGCTGTTTGCAATTCTTCAAATTTGAATGCAGAAGATCAGAGGAACTGTCAGGATTTGGATCTGAACAAAGCCTCCTTTCTACTTAGAAATGTGTTGGGAAAATGGAGTTCAAAGCTGTTTGGAGTAGCTTTACTTGCATCAGGCCAAAGTTCTACTATAACAGGAACATATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTGCGACTAGAGCCATGGGTTCGGAATATGCTAACTCGTTGTTTAGCCATAGTTCCTAGCTTGATTGTTGCGGTCATTGGTGGCTCTGCTGGGGCTGGCAAGCTCATAATAATTGCATCAATGATCTTATCATTTGAGCTTCCTTTTGCTTTAATTCCACTTCTCAAGTTCACAAGCAGCAAAACCAAGATGGGAGAGCATGTCAACTCTATCATGATTTCAGCCGTTACTTGGATAATTGGTTCCCTAATTATGGCCATTAATATATATTATCTATTGACTGGCTTTGTGAAGCTGCTTCTCCACAGTCATGTTCAAGTTGTGGCCAAGGTATTTTTGGGCATACTAGGATTTTCAGGCATGGCTGTATATTTGGCTGGAATAGTATATCTGGTACTTCGCAAAAATAACAAGGCTACAAGCCTTTTGACACTAACAGCACCAGAAATCCGGCAAACAGCAAATGAACAAGGCAATGCCTCTATCCATTCTCTCTCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAGAACTAGTCCTGTTGATCTTGACTGA 1674 0.4331 MVGRGGSGTGSGCGSASGSASGSVQPQFIASTGSNTNTPLIDNSDVDQVVVPDTRSWKNLFSYMGPGFLVSIAYIDPGNFETDLQSGAQHKYELLWIILVASCAALLIQSMAANLGVVTGKHLAEHCRNEYAWATNFILWFIAEIAIVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIAACFFAELGYAKPVAKEVLKGLFVPELKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYLIESAFALMVAFLINVSVISVSGAVCNSSNLNAEDQRNCQDLDLNKASFLLRNVLGKWSSKLFGVALLASGQSSTITGTYAGQYVMQGFLDLRLEPWVRNMLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGEHVNSIMISAVTWIIGSLIMAINIYYLLTGFVKLLLHSHVQVVAKVFLGILGFSGMAVYLAGIVYLVLRKNNKATSLLTLTAPEIRQTANEQGNASIHSLSREDIVSMQLPQRTSPVDLD 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03303 557 PRINTS Natural resistance-associated macrophage protein signature 352 371 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 PRINTS Natural resistance-associated macrophage protein signature 192 213 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 PRINTS Natural resistance-associated macrophage protein signature 167 186 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 PRINTS Natural resistance-associated macrophage protein signature 242 265 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 PRINTS Natural resistance-associated macrophage protein signature 380 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 PRINTS Natural resistance-associated macrophage protein signature 412 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 PRINTS Natural resistance-associated macrophage protein signature 139 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 39 512 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 Pfam Natural resistance-associated macrophage protein 80 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 59 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst7g03303 557 NCBIfam Nramp family divalent metal transporter 65 433 - -
Arst7g03303 557 Hamap Divalent metal cation transporter MntH [mntH]. 41 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03303 Arst-Chr7 78503038 78506658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03303 31 557 Inorganic Solute Cotransporters AT1G15960 78.531 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03303 K21398 - gmx:100797298 905.59