Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03282 ATGATATATGTGGAGGGAAACTCGTTTATCATGCAGTATGATGAGGATGGATTCGGTGAAATGATTGAGGAAGGCAGGGCACTCTGCAGTCTGCATGCAAAGAAGGCGCGTTTTGGTGTGAATTATATTGCAGATGGCGGAAGCAAAGTCGATAGACGACAAGTGTTTTCATCCAAACCACAACAAAGCAGCCAGACGGCCATCGGAAATAGGGCAACAAGTTCTTATATACTGTCTTTCGATAAATCGACAAGTAAGAGGAGAAGAAGCGCTTCAGAGACGGCGGATCACATAATGTCAGAGAGGAACAGGAGACAGGAACTCTCTAGAAAGTTCATTGCACTTTCCGCAACTATACCTGGCTTGAAGAAGACGGAGAAGGCGCACGTACTTGAAGAAGCCATAAAGTACATGAAAGAACTAGAAGAGCGTGTGAAGGTGCTGGAAGAAGATGGCGAGATAAGCATAACGAGATCTCATGTGTGCGGGTGCGGCCACGAGACACTTCCAGAAGTTGAAGCAAGAGTATTTGGGAAGCAAGTGCTCATCAAAATTCACTGTGTCACTCAATGCGGCGTTCTCATCCAAATATTCTCCCAACTTCAACTCCTTCATCTTTCCATTTCCAGCAGTAACGTCTTACCATTTGGGAACACTCTTGACATCACCATTATTGCTCACATGGGTCACAAATGCAGCTTCATAGTGAAGGATCTAGTCAGAAACCTCAGACAAGTGGCTATGCTTAAGGAAGAAGAATGTCAACACCTACCAAATATACCAATCAAGTGCACTCATTAA 801 0.4444 MIYVEGNSFIMQYDEDGFGEMIEEGRALCSLHAKKARFGVNYIADGGSKVDRRQVFSSKPQQSSQTAIGNRATSSYILSFDKSTSKRRRSASETADHIMSERNRRQELSRKFIALSATIPGLKKTEKAHVLEEAIKYMKELEERVKVLEEDGEISITRSHVCGCGHETLPEVEARVFGKQVLIKIHCVTQCGVLIQIFSQLQLLHLSISSSNVLPFGNTLDITIIAHMGHKCSFIVKDLVRNLRQVAMLKEEECQHLPNIPIKCTH 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03282 266 Coils Coil 131 151 - -
Arst7g03282 266 PANTHER BHLH TRANSCRIPTION FACTOR 56 248 - -
Arst7g03282 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 95 155 IPR036638 GO:0046983
Arst7g03282 266 Gene3D - 81 155 IPR036638 GO:0046983
Arst7g03282 266 Pfam Helix-loop-helix DNA-binding domain 97 142 IPR011598 GO:0046983
Arst7g03282 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 92 141 IPR011598 GO:0046983
Arst7g03282 266 SMART finulus 98 147 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03282 Arst-Chr7 78424196 78430678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03282 89 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 42.458 8.21e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst7g03282 HLH 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03282 - - adu:107459543 504.212