Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03235 ATGGCGCAAATTCTCCTGCACGGGACTCTCCATGTCACCATCTATGAGGTCGATAAGCTCAAGACAAGTGGTGGCAATGTTTTCACCAAGCTGGTGCAAAACATCGAGGAGACAGTTGGTTTTGGAAAAGGAGTTACCAAACTGTATGCAACCATTGATCTGGAAAAAGCACGAGTTGGAAGGACCAGGATTATAGAAAAAGACCATAGTAATCCCAGATGGTACGAATCTTTTCACATTTACTGTGCCCACATGGCATCAAACATCATATTCACTGTGAAAGATGACAATCCCATTGGAGCAACTTATGTCACAAAAGACAAGAACTGGGCACGTGGTGTTAGGAGTGCTAAATTCCCTGGTGTTCCTTACACTTTCTTCTCGCAAAGAAGAGGCTGCAAGGTTTCTCTTTACCAGGATGCTCATGTCCCTGATAATTTTGTCCCCAAAATACCCCTTGCTGGAGGCCAGACTTACCAGCCTCATAGGTGCTGGGAGGATGTGTTTGATGCAATCGACAAAGCGAGGCACTTGATATACATAACCGGTTGGTCTGTTTACACTGAGATAACATTGGTGAGGGATTCAAGGAGGCCAAAGCCTGGTGGAGACTTAACGATTGGTGAGCTTCTCAAGAAGAAGGCGAATGAGGGTGTCAGAGTCTTGATGCTTGTTTGGGATGACAGAACATCTGTTCCCTTGTTGAAAAAAGATGGGTTGATGGCTACTCATGATGAAGAAACTGAGAAGTATTTCCAAGGAACTGAAGTGCATTGTATTTTGTGCCCACGGAATCCTGATGATGGTGGAAGCATTATTCAGGATTTGCAAATCTCTACAATGTTTACTCATCACCAGAAGATTGTGGTGGTGGATAGTGACATGCCTAGCGGAGATTCGGGTAAGAGAAGGATAGTGAGCTTTGTTGGGGGTATTGATCTCTGTGATGGAAGATATGACACTCAATTCCACTCACTTTTCAGAACCTTGGACACCGCACACCATGATGATTTTCATCAGCCAAACTTTGCCGGTGCTTCCATCATGAAAGGTGGTCCTAGAGAGCCTTGGCATGACATCCACTCTCGCCTTGAAGGGCCTATTGCATGGGATGTTCTGTTCAACTTCGAGCAGAGATGGAGGAAGCAAGGTGGAAAGGACTTGCTCATTCCGCTGAGAGAGCTTGAAGATGTCATCATCCCGCCATCTCCAGTAACATTTGCGGAAGATCACGAGACATGGAATGTTCAATTATTCAGATCAATTGATGGTGGAGCTGCTTTTGGCTTCCCAGAGACTCCTGAAGATGCTGCCAGAGCTGGCCTTGTTAGTGGAAAGGATAACATCATAGACCGTAGCATCCAAGATGCTTATATCCATGCAATTAGGCGCGCAAAGAATTTCATCTATATCGAGAATCAGTATTTCCTCGGAAGCTGTTTTGGATGGAGCCCTGATGACATTAAGCCTGAGGACATTGGTGCTTTGCATCTAATTCCAAAGGAGCTTTCACTTAAGATTGTAAGCAAAATCGAAGCCGGGGAGAGGTTCACTGTGTACATTGTGGTTCCAATGTGGCCAGAAGGGTTCCCAGAGAGTGGTTCAGTTCAAGCCATATTGGATTGGCAGAGGAGGACAATGGAGATGATGTACAAGGATATAGTTGAGGCACTCAATGCCAAGGGAATTGTGGAAGATCCCAGAAACTATTTGACATTCTTCTGCCTCGGCAACCGGGAGGTCAAGAAGCCAGGAGAATATGAGCCTTCAGAGAGACCAGACCCTGATTCTGATTACATAAAAGCCCAGGAGAACCGTCGATTCATGATTTATGTCCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGATCTGCAAACATCAACCAGAGATCGATGGATGGTGCAAGAGACTCGGAAATAGCCATGGGAGCTTATCAGCCATACTATTTGAGTGCAAGGGAGCTAGCAAGGGGACAGATCCATGGTTTCCGCCTTGCGCTGTGGTATGAGCACCTTGGCATGATCAGAGAATCCTTCCTCCAGCCTGAGAGTGAAGAATGTATCAAGATGGTGAACCAGGTTGCTGACAAGTATTGGGATCTGTATTCCAGTGAGTCCCTTGACCATGACCTCCCCGGCCACCTTCTGCGCTACCCCGTTGGCATTTCCGGTGATGGAACTGTCACCGAGCTTCCAGGATTCGAGTTCTTCCCTGACACAAAGGGTCGTGTTCTTGGAACCAAAACTGACTACTTGCCCCCTATCCTTACTACTTAA 2289 0.4609 MAQILLHGTLHVTIYEVDKLKTSGGNVFTKLVQNIEETVGFGKGVTKLYATIDLEKARVGRTRIIEKDHSNPRWYESFHIYCAHMASNIIFTVKDDNPIGATLXVTKDKNWARGVRSAKFPGVPYTFFSQRRGCKVSLYQDAHVPDNFVPKIPLAGGQTYQPHRCWEDVFDAIDKARHLIYITGWSVYTEITLVRDSRRPKPGGDLTIGELLKKKANEGVRVLMLVWDDRTSVPLLKKDGLMATHDEETEKYFQGTEVHCILCPRNPDDGGSIIQDLQISTMFTHHQKIVVVDSDMPSGDSGKRRIVSFVGGIDLCDGRYDTQFHSLFRTLDTAHHDDFHQPNFAGASIMKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLIPLRELEDVIIPPSPVTFAEDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSCFGWSPDDIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMEMMYKDIVEALNAKGIVEDPRNYLTFFCLGNREVKKPGEYEPSERPDPDSDYIKAQENRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYYLSARELARGQIHGFRLALWYEHLGMIRESFLQPESEECIKMVNQVADKYWDLYSSESLDHDLPGHLLRYPVGISGDGTVTELPGFEFFPDTKGRVLGTKTDYLPPILTT 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03235 763 SUPERFAMILY Phospholipase D/nuclease 106 400 - -
Arst7g03235 763 SUPERFAMILY Phospholipase D/nuclease 407 692 - -
Arst7g03235 763 Gene3D Endonuclease Chain A 155 396 - -
Arst7g03235 763 Gene3D Endonuclease Chain A 435 657 - -
Arst7g03235 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 609 636 IPR001736 GO:0003824
Arst7g03235 763 CDD PLDc_pPLDalpha_2 447 656 - -
Arst7g03235 763 Gene3D C2 domain 4 108 IPR035892 -
Arst7g03235 763 Pfam C2 domain 8 98 IPR000008 -
Arst7g03235 763 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 100 IPR035892 -
Arst7g03235 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 281 319 IPR001736 GO:0003824
Arst7g03235 763 ProSiteProfiles C2 domain profile. 1 138 IPR000008 -
Arst7g03235 763 PANTHER PHOSPHOLIPASE D 106 752 IPR015679 -
Arst7g03235 763 Pfam Phospholipase D Active site motif 281 319 IPR001736 GO:0003824
Arst7g03235 763 Pfam Phospholipase D Active site motif 610 636 IPR001736 GO:0003824
Arst7g03235 763 PIRSF PLD_plant 1 105 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst7g03235 763 PIRSF PLD_plant 103 763 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst7g03235 763 FunFam Phospholipase D 422 655 - -
Arst7g03235 763 PIRSF PLD_plant 1 105 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst7g03235 763 PIRSF PLD_plant 103 763 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst7g03235 763 FunFam Phospholipase D delta 156 399 - -
Arst7g03235 763 SMART pld_4 281 319 IPR001736 GO:0003824
Arst7g03235 763 SMART pld_4 609 636 IPR001736 GO:0003824
Arst7g03235 763 SMART C2_3c 9 120 IPR000008 -
Arst7g03235 763 Pfam Phospholipase D C terminal 682 753 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03235 Arst-Chr7 78208291 78212128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03235 1 763 Phospholipase D Gene Family (Wang group) AT3G15730 75.802 0.0 1298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03235 K01115 - gmx:100784434 1397.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00156 2 1363630 1367637 Arst7g03235 7 78208291 78212128 ECH
Arst8g03484 8 45611393 45618241 Arst7g03235 7 78208291 78212128 ECH
Arst7g03235 7 78208291 78212128 Arst7g03235 7 78208291 78212128 ECH
Arst7g03235 7 78208291 78212128 Arst2g00156 2 1363630 1367637 PCT