Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03234 ATGGTGCAGTCAAAGAAATTCAGAGGTGTCAGGCAACGCCATTGGGGCTCTTGGGTTTCTGAGATTCGCCACCCATTATTGAAAAGGAGGGTGTGGCTTGGAACATTTGAAACTGCTGAAGAAGCAGCAAGAGCATACGATGAAGCAGCTATTTTGATGAGTGGAAGGAACGCCAAGACTAACTTCCCAGTTTCAGAGAACAATAACAATAACAACAACAGTTCCAGTGGCACTGCTTCTTCTTCATCTTCATCTTCCACAACAACATTCTCTGCAGTTCTTAGTGCAAAGCTGAGGAAGTGCTGCAAGTCCCCATCACCTTCTCTCACGTGCCTCAGGCTCGACACAGAGAATTGCCACATTGGTGTGTGGCAGAAGCGGGCCGGGCCTCGCTCCGAATCCAACTGGATCATGATGGTCGAGTTGGAAAGGAACAACACCACCACCCCCCTCACCACCCAACCTGCTTCTTCTTCCTTGAAGCCAGAGGAAGCCACCAATAATAACGGTGGCTTGGATGAGGAACAGAGGATTGCCCTGCAGATGATAGAAGAGCTTCTCAATAGGAATTAA 573 0.4869 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVSENNNNNNNSSSGTASSSSSSSTTTFSAVLSAKLRKCCKSPSPSLTCLRLDTENCHIGVWQKRAGPRSESNWIMMVELERNNTTTPLTTQPASSSLKPEEATNNNGGLDEEQRIALQMIEELLNRN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03234 190 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Arst7g03234 190 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Arst7g03234 190 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Arst7g03234 190 MobiDBLite consensus disorder prediction 62 86 - -
Arst7g03234 190 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Arst7g03234 190 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Arst7g03234 190 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Arst7g03234 190 MobiDBLite consensus disorder prediction 147 170 - -
Arst7g03234 190 FunFam Ethylene-responsive transcription factor 2 5 65 - -
Arst7g03234 190 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Arst7g03234 190 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 148 - -
Arst7g03234 190 CDD AP2 5 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03234 Arst-Chr7 78178946 78179665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03234 1 190 AP2-EREBP Transcription Factor Family AT1G15360 63.682 5.99e-82 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst7g03234 AP2 7.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03234 - - gmx:100796962 261.536