Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03191 ATGAGTGGAGCTTCGTTAACAGGCTTGCAAGACCACCTCAAACTGGCAAGAGAGTACGCTCTCGAAGGACTCTACGACACTTCCATTATCTTCTTCGACGGCGCCGTTGCTCAGATCAACAAGCATCTAAACACTGTTGAGGATCCGTTAATCCGAGCGAAATGGATGAACGTGAAGAAAGCTCTGTCGGAGGAAACCGAAGTGGTGAAGCAGCTGGATGCGGAGAGAAGGGCATTTAAGGAAACTCCTGTTGGGAATGGGAGGAGGCGTCCTGCTTCACCTCCGATCTCTACCAAATCTAACTTCGTTTTTCAGCCGTTGGATGAGTATCCAACTTCTTCATCCAGCGGTCCAGGTGGTCCCTTGGACGATCCCGATGTGTGGAGACCGCCCAGTCGAGATGATTCTAGGTCTGGTAGCGGGAGAAGGCCCGTTGTTTCTGCCCGCGGGCCTACTCGCAAGTCCCAGCAGGATGGAGCTTGGGCCCGTGGCGGCCCTACCAGGCCCGCTGCACGCGGTGCTAAGGCTGCTGGTGGTGCTGCTTCTGGTAGGGTTAACTCCGGAGCCCGGGGCGCAACCGCTGCCAAGAAAGGCACTGCTTCTGGAAAATCCAGCAAATCCGATTCAGTTAATGGTGATGGTGATGATGGGAAGACAAAGAAGGGGCAATATGAAGGTCCTGATCCGGACTTAGCTGAGATGCTTGAAAGGGACGTGTTGGAGACGTCTCCCGGAGTGAGATGGGATGATGTTGCAGGCCTCACTGAAGCCAAGAGGCTTCTTGAAGAAGCTGTTGTCCTTCCATTATGGATGCCTGAGTATTTCCAGGGGATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGTCCTCCCGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCTAAATGGCGTGGAGAGAGTGAACGCATGGTGCGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCACTGAGGCGAAGGCTGGAAAAGCGTATATACATTCCTCTTCCGAATTTTGAGAGTCGTAAAGAGTTGATCCGTATCAATTTGAAGACTGTGGAGGTGGCCCCTGATGTCAATATAGATGACGTGGCTCGCCGTACAGAAGGCTATAGTGGAGATGATTTGACAAATGTATGTCGTGATGCTTCCCTGAATGGTATGAGGCGTAAGATAGCGGGAAAAACACGCGATGAGATCAAGAACATGCCCAAGGATGAGATTTCAAAGGATCCTGTTGCTATGTGTGATTTTGAGGAAGCTTTGAAGAAAGTCCAGCGAAGTGTTTCTCAGGCTGACATCGAACGTCATGAGAAGTGGTTTACTGAATTTGGATCAGCATAA 1602 0.4925 MSGASLTGLQDHLKLAREYALEGLYDTSIIFFDGAVAQINKHLNTVEDPLIRAKWMNVKKALSEETEVVKQLDAERRAFKETPVGNGRRRPASPPISTKSNFVFQPLDEYPTSSSSGPGGPLDDPDVWRPPSRDDSRSGSGRRPVVSARGPTRKSQQDGAWARGGPTRPAARGAKAAGGAASGRVNSGARGATAAKKGTASGKSSKSDSVNGDGDDGKTKKGQYEGPDPDLAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISKDPVAMCDFEEALKKVQRSVSQADIERHEKWFTEFGSA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03191 533 MobiDBLite consensus disorder prediction 93 119 - -
Arst7g03191 533 SMART AAA_5 281 424 IPR003593 GO:0016887
Arst7g03191 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 519 IPR027417 -
Arst7g03191 533 Gene3D - 3 80 - -
Arst7g03191 533 Pfam ATPase family associated with various cellular activities (AAA) 285 422 IPR003959 GO:0005524|GO:0016887
Arst7g03191 533 MobiDBLite consensus disorder prediction 79 229 - -
Arst7g03191 533 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 533 IPR028596 GO:0008017|GO:0008568|GO:0051013
Arst7g03191 533 FunFam Katanin p60 ATPase-containing subunit A1 423 509 - -
Arst7g03191 533 CDD Kp60-NTD 9 75 - -
Arst7g03191 533 Pfam AAA+ lid domain 444 485 IPR041569 -
Arst7g03191 533 PANTHER AAA DOMAIN-CONTAINING 25 532 - -
Arst7g03191 533 FunFam Katanin p60 ATPase-containing subunit A1 243 411 - -
Arst7g03191 533 Gene3D - 243 524 IPR027417 -
Arst7g03191 533 FunFam Katanin p60 ATPase-containing subunit A1 4 80 - -
Arst7g03191 533 ProSitePatterns AAA-protein family signature. 394 413 IPR003960 GO:0005524|GO:0016887
Arst7g03191 533 Gene3D - 423 509 - -
Arst7g03191 533 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03191 Arst-Chr7 77961206 77964285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03191 237 525 Calmodulin-binding Proteins AT3G56690 40.000 1.81e-50 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03191 7 77961206 77964285 Arst2g03220 2 89941444 89950531 PCT