Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03188 ATGGCCATGTTGGATGTTGACTTTAAGCTCAGCCTCTCTCTTCCCGGTACTCAAACCGGAGCCACCAAACGCTGCCGCCGCTTTCCGGAGGAGGACACCGTTGATCTTCTTCATTCCAAGGCACAGATGGTGGGGTGGCCGCCGGTGATGAGGGCAAACAGAAAGTGTGGCGTGAAGGTGGGTGTGGACGGAGCACCATATCTAAGAAAAGTGGATCTTGAAGTGTATGAGAGTTATGAAGAGCTCTTCAAGGCATTGGAGACTATGTTTTGTTGCTCAACCATTATTTGTAATGAGAATAAGGTGATGGATAATTATATGCCAACTTATGAGGACAAAGACGGTGATTGGATGTTAGTTGGCGATGTACCTTGGGAGATGTTCGTTGAATCATGCAAGAGAATAAGACTCATGATAAAGTAG 423 0.4657 MAMLDVDFKLSLSLPGTQTGATKRCRRFPEEDTVDLLHSKAQMVGWPPVMRANRKCGVKVGVDGAPYLRKVDLEVYESYEELFKALETMFCCSTIICNENKVMDNYMPTYEDKDGDWMLVGDVPWEMFVESCKRIRLMIK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03188 140 Pfam AUX/IAA family 55 138 IPR033389 -
Arst7g03188 140 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 138 IPR003311 GO:0005634|GO:0006355
Arst7g03188 140 ProSiteProfiles PB1 domain profile. 55 140 IPR000270 GO:0005515
Arst7g03188 140 Gene3D - 51 140 - -
Arst7g03188 140 SUPERFAMILY CAD & PB1 domains 51 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03188 Arst-Chr7 77940282 77941608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03188 58 135 B3 DNA Binding Superfamily AT2G46530 39.744 5.53e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst7g03188 AUX_IAA 6.6e-35 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03188 K14484 - gmx:100500488 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03188 7 77940282 77941608 Arst7g03188 7 77940282 77941608 ECH