Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03187 ATGGCCAAAGAAGGTCTTGGACTTGAAATCACGGAGCTAAGATTGGGTCTTCCCGGTGGGGATTCATCAGCATCGAAGAAGAGGGTGTTTTCGGAGATTGATGGAGGGGAAAATGGATCCTCAACGGAGAGGAATAATAAGAACGCGGTGGTGGGGTGGCCACCGGTGTGCTCTTACCGGAAGAAGAAGACGTCGTCGAAAATGTACGTGAAGGTTAGCATGGATGGTGCTCCATTCTTGCGTAAAATTGATCTTGCCATGCACAAGGATTACTCCCACCTAGCCTTTGCCTTGGACAACCTCTTTGCTTCCTATGGAATCGATGCGGAGAATTGTGAACAAGTTCCGATTTACGAGGACAAAGATGGTGACTGGATGCTCGTCGGAGATGTTCCTTGGGAGATGTTTATTGAATCATGCAAGCGTCTGAGGATTATGAAGAGATCAGATGCAAAGGGCTTTGGTCTGCAACCAAAAGGATCATTAAAGGGATTTATAGAAGGCGTGAAAAATTAA 516 0.4651 MAKEGLGLEITELRLGLPGGDSSASKKRVFSEIDGGENGSSTERNNKNAVVGWPPVCSYRKKKTSSKMYVKVSMDGAPFLRKIDLAMHKDYSHLAFALDNLFASYGIDAENCEQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFGLQPKGSLKGFIEGVKN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03187 171 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 152 IPR003311 GO:0005634|GO:0006355
Arst7g03187 171 ProSiteProfiles PB1 domain profile. 67 150 IPR000270 GO:0005515
Arst7g03187 171 Gene3D - 61 159 - -
Arst7g03187 171 Pfam AUX/IAA family 63 154 IPR033389 -
Arst7g03187 171 SUPERFAMILY CAD & PB1 domains 59 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03187 Arst-Chr7 77933365 77936064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03187 60 152 B3 DNA Binding Superfamily AT2G46530 32.258 6.32e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst7g03187 AUX_IAA 9.4e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03187 K14484 - gmx:100811879 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03187 7 77933365 77936064 Arst7g03187 7 77933365 77936064 ECH