Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03148 ATGACTAATCTCTCAGTATGTGTGAATGTAACACAGGGTAAGGGAACAGGGAGCTTTGGTAAGAGGAGGAACAAGACTCACACCCTCTGTGTGAGGTGCGGCCGCCGGAGCTTTCACCTCCAGAAGAGTCGCTGCTCCGCCTGCGCTTTCCCCGCTGCACGCAAGAGGAAATATAACTGGAGCGTGAAGGCCATCCGCAGAAAGACCACCGGCACCGGCAGGATGAGGTACCTCCGCCACGTGCCTCGCCGATTCAAGAGCGGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCATCTGCATAA 321 0.5607 MTNLSVCVNVTQGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAASA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03148 106 Pfam Ribosomal protein L37e 14 64 IPR001569 GO:0003735|GO:0005840|GO:0006412
Arst7g03148 106 Coils Coil 103 106 - -
Arst7g03148 106 Gene3D - 12 98 IPR011331 GO:0003735|GO:0005840|GO:0006412
Arst7g03148 106 PANTHER 60S RIBOSOMAL PROTEIN L37 13 105 - -
Arst7g03148 106 FunFam Ribosomal protein L37 12 99 - -
Arst7g03148 106 SUPERFAMILY Zn-binding ribosomal proteins 13 66 IPR011332 GO:0006412
Arst7g03148 106 Hamap 50S ribosomal protein L37e [rpl37e]. 13 64 IPR001569 GO:0003735|GO:0005840|GO:0006412
Arst7g03148 106 ProSitePatterns Ribosomal protein L37e signature. 15 34 IPR018267 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03148 Arst-Chr7 77696358 77697608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03148 14 106 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 89.247 1.08e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03148 K02922 - csv:101221537 175.637