Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03139 ATGATAGAACCATTTTTGCTCCTTAAAAAACATACCCATTCCTCACCACACCATCCAACAACAACAACAACCACCTTCTCAATGGCCGCGGACATGTCCAACACCAACACCAACACCAACAACAACAACAACAACCACCCTTCTCACGCCAAGGACTTCTTCGCTTCCCCAGCTCTCTCCCTTAGCCTTGCTGGCATATTTCGGCATGCTGGGGTGGCGGCGGCGGAGGGAGAGGCTGCAACCTCCAACATGGAAGTGGAGGATGGCGATGAAGGCAGCGGCGGAGGAGGAGGCGCCGGTCACACGGTGGATATTAGCAGCGAGAACTCCGGCCCCACTAGATCGAGATCGGAGGATGACTACTTTGAAGGAGAAGGTGAGCATGAAGATGAAGATATTATCGGTGATGATAACAATAACAATAACAAGAACAAGAACAAGAAGAAGAGGAAGAAATATCACAGGCACACCGCGGAGCAGATCAGAGAAATGGAAGCGCTATTCAAAGAGTCGCCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAGCTAGGCCTTGCTCCAAGACAAGTCAAGTTTTGGTTCCAAAATCGCAGAACCCAAATCAAGGCAATACAAGAGCGACATGAAAACTCATTGTTGAAGACGGAAATAGAGAAACTAAAGGAGAAAAACAAAGGGTTGAGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGTGTTGCAACCACTAGTACCAGAGACGGTGCCATTCCAACTGAAGAACAACAGCTTCGCATTGAGAATGCCAAACTCAAAGCTGAGATCGAGAAGCTTCGAGGAGCTTTAGGAAAATACGGTGGATCAGGTGGTGGTGGATCAACGTCTCCTTCATGTTCTTCTGGTGCTGCTGGTGGACATGAGCAAGAGAATAGAAGCTCGTTGGACTTTTACACTGGAATCTTCGGAGTTGACAAGTCAAGGATAATGGATACAGTGAACAAGGCTATGGAGGAGCTCATAACCATGGCAACAATGGGGGAACCCTTGTGGCTTCGTAGTGTTGAGACTGGCCGTGAGATACTCAACTACGATGAGTACATCAAACACTTCTCATCCCTTCAAAATTCTTCATCAAACAACACTAACACTACTCCTTCATCATCAAAGAGATCCATTATTGAAGCTTCAAGAGACACTGCCCTTGTCTTTGTTGATCTCCCACGCCTTCTCCAAACTTTCTTAGATGCGAATCAGTGGAAGGAAATGTTTCCATGTTTAGTATCTAAGGCGGCGACTGTGGATGTTATATGCAACGGAGAAGGTTCTAACAGGAATGGTGCAGCGCAACTGCATAGTAGTCGACATACATATATGCTGACTAATGTTACAAGTGTTGCTACATTGGCCGGGAGGAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGGGTTTCTGCCATGCAGTTGGTGCATCAAGCTTCCACACATGGACCAAGGTTACAAGTAAAACTGGGGAAGATATTAGGATCAGTTCACGGAAGAACTTGAACGATCCTGGTGAACCTCTTGGACTCATACTCTGCGCTGTTTCTTCTGTGTGGTTACCTGTCTCTCCTAATGTCTTGTTTGATTTCTTGAGGGATGAAACCCGCCGCACTGAGTGGGATATAATGTCCAGTGGTGGCTCAGTTCAGTCCATTGCAAATTTGGCCAAAGGACAAGACCGCGGCAATGCGGTAACCATCCAAACAATAAAATCGAAGGAAAATAGTATGTGGGTAGTGCAAGATTGCTGCACCAATGCTTATGAATCAATGGTGGTGTATGCTCCTGTGGACATCACTGGCATTCAATCTGCGATGACAGGTTGCGATTCTAGCAATCTCGCCGTACTTCCGTCGGGATTCTCGATTGTTCCTGATGGGATGGAATCAAGGCCAATGGTGATTACTTCAAGACAGGAGGAGAAGAACACAGCAGAAGGAGGATCCTTGTTCACCATAGCATTCCAGATTCTCACCAATGCATCTCCAACAGCCAAGTTAACCATGGAGTCTGTGGAATCAGTCAACACTCTCTTATCTTGTACTTTGAGAAATATCAGAACAAGTTTACAATGCGAAGATAGTTAA 2124 0.4609 MIEPFLLLKKHTHSSPHHPTTTTTTFSMAADMSNTNTNTNNNNNNHPSHAKDFFASPALSLSLAGIFRHAGVAAAEGEAATSNMEVEDGDEGSGGGGGAGHTVDISSENSGPTRSRSEDDYFEGEGEHEDEDIIGDDNNNNNKNKNKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLKEKNKGLRETINKACCPNCGVATTSTRDGAIPTEEQQLRIENAKLKAEIEKLRGALGKYGGSGGGGSTSPSCSSGAAGGHEQENRSSLDFYTGIFGVDKSRIMDTVNKAMEELITMATMGEPLWLRSVETGREILNYDEYIKHFSSLQNSSSNNTNTTPSSSKRSIIEASRDTALVFVDLPRLLQTFLDANQWKEMFPCLVSKAATVDVICNGEGSNRNGAAQLHSSRHTYMLTNVTSVATLAGRKSILKLAQRMTWGFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGLILCAVSSVWLPVSPNVLFDFLRDETRRTEWDIMSSGGSVQSIANLAKGQDRGNAVTIQTIKSKENSMWVVQDCCTNAYESMVVYAPVDITGIQSAMTGCDSSNLAVLPSGFSIVPDGMESRPMVITSRQEEKNTAEGGSLFTIAFQILTNASPTAKLTMESVESVNTLLSCTLRNIRTSLQCEDS 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03139 707 Coils Coil 258 278 - -
Arst7g03139 707 Gene3D - 135 220 - -
Arst7g03139 707 Pfam START domain 330 456 IPR002913 GO:0008289
Arst7g03139 707 ProSiteProfiles START domain profile. 318 433 IPR002913 GO:0008289
Arst7g03139 707 MobiDBLite consensus disorder prediction 282 306 - -
Arst7g03139 707 Pfam Homeodomain 150 205 IPR001356 GO:0003677
Arst7g03139 707 SUPERFAMILY Bet v1-like 320 434 - -
Arst7g03139 707 Coils Coil 206 233 - -
Arst7g03139 707 FunFam Homeobox-leucine zipper protein HDG1 136 223 - -
Arst7g03139 707 SUPERFAMILY Homeodomain-like 139 208 IPR009057 -
Arst7g03139 707 ProSiteProfiles 'Homeobox' domain profile. 147 207 IPR001356 GO:0003677
Arst7g03139 707 SUPERFAMILY Bet v1-like 477 693 - -
Arst7g03139 707 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 148 448 IPR042160 -
Arst7g03139 707 CDD homeodomain 154 205 IPR001356 GO:0003677
Arst7g03139 707 ProSitePatterns 'Homeobox' domain signature. 182 205 IPR017970 GO:0000981|GO:0006355
Arst7g03139 707 MobiDBLite consensus disorder prediction 78 157 - -
Arst7g03139 707 SMART HOX_1 149 211 IPR001356 GO:0003677
Arst7g03139 707 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03139 Arst-Chr7 77648489 77657128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03139 446 706 Homeobox Transcription Factor Family AT1G79840 64.045 4.44e-114 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst7g03139 START 1e-10 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03139 K09338 - gmx:100808292 532.332