Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03084 ATGAGTATGGTTAAAATAGTGTTAGGAACAGCAATCGAAGTGAATAAGGGCATAGTAGGAGTTGTTGCAGACTATAATGATAGAAGTGGAAAAGAGGAAATAGTGGCTATTAAGATGGCATTGGAGGATTTCTATCATTACACCAATCAAAGCTTTGGTCTTCACATAAGGGACTCTCATGGGGATCCCCTTAAAGCTGCTCTTGCAGCAAGGGACCTTATTGACAAAGAGCAAGTGCAAGCAATTATAGGTCCACAAACATGGGAAGAAACAACATTAATAGCTGAACTTTGCAACCAAAACATGACACCTCTTCTATCCTTAGCAGATGTAACTCCAAATTGGGCAACATCAAAATGGCCCTTCATGGTTCAAACTTCACCTAATGCATTAAAACAAATGAAAGCAGTATCTGCTATTGTTCAATCATGGGATTGGTACAGTGTCAACATAATTTATGAAGACAAAGATGCTTCATCCACAGAATCTTTATCCAATATCTATTTAGCACTCACTGAAGCAGGTATCACAATAAGTAATCTCTTGAGTGTTCCTCCTTTTCCTTCCTCTTCATTGTCCAAAGATCTTGAGAATCTTAGAGATGGCCATTGTAGAGTCTTTGTTGTTGTTAGTTTGTCCCTCAATTTGGCCATAAACCTCTTCGAAACTGCGTCGAAAATGGATATGGTTGGGAAGGACTATGTTTGGATCATTACTGACCCTTTTACAAGCCTTGTTCATTCCTTAAATGCTTCAACTATATCCTCAATGCAAGGAATCATTGGAGTCAAGAGCTATTTCCAAGAAAATGGGAAAAAACATGAGGATTTCTACCGGAAATTTCGTCGAAAATTTAGCCTAGATTACCCTCAAGAACTCAACAATGAGCCAGGAACTTTTGCAGCACATGCTTATGATGCTGCATGGACTCTGGCTCTAGCCATGAGTCAAACCAACAATAATGAAGGTGGCAAATTCCTGATGAACAAGATTTTGCATAGTAATTTTCTTGGCCTAAAGGGAAGAATTCAATTCAATGATCATACCTTAGATCCTACACAGACTTTTCAAATCATCAATGTGATTGGGAAGGGATACAAGGAGATTGGTTTTTGGTCAAATGGACTTGGATTTTCAAGCAATATTGGTCAACATGATGTTAGTTATAGTTCTTCAATGAAGGAACTAGGACAGGTTATGTGGCCAGGTAGACCTTGGGAAACTCCAAGAGGGTGGGCCCTACCAACAATTGAGAAGCCATTAAGAGTTGGGGTCCCTGCTTTGTCCACATTGAAGCAATTTATAAACATAACTCATGATCAATTTCAGGGATTCACTATTGATCTTTTCAAAGCAACTATGGACTTGATGCCCTACCATGTTCCATACAAGTTCTATGCTTTCAATGATACTTATGATGAGTTGGTGAGACAAATTTATTTGAAGAATTTTGATGCAGTAATTGATGTAACAATAATCTCGTACCGGTACCAGTATGCCGAATTCACTCAGCCATACACTGATCCTGGAGTGGTGATGGTAGTCCCTTTGAAATCAAAAACAGGACACAGAGCTTGGCTGTTTGTGAAGCCTTTCACAAAGACAATGTGGATCCTAATAGTGTTAGTGATTATCTACAATGTCTTTGTTTTATGGATGCTAGAAAGAAATCATTTCTGTGAACTCAAGGGCTCCATACTCAAACAATATGGCAACATTGCTTGGTTGGCAATGACCCCTCTCGTAAACTTAAATGACATAGGAGATAAATTACACAACAATTTATCAAGGGTGGCTATGGTGGTGTGGTTATTTGTGGCCCTCATTATAATGCAGACATACACAGCCAACTTAACCAGCATGCTAACAGTTGAAAGACTTGAACCAACAATAGGTGATGTTGATCAGTTAAGAAATAACAATGCCATGGTTGGATACAGTACTGGATCTTTCTTGAAAAATTATCTTCATGATGTTCTACACTTTAACCCTGCAAACATAAGGCAATTTAGATCACATGAAGAGTTCGCTGAAGCTCTCAGAAGAAAAGAAATAGCAGCTGTCTTTATTGAAGCTCCTGGGGCCAAGATTTTCCTTGCAAAGTACTGTAAAGAGTTTATTCAAGCCGGGCCCATGTATAAAATCGGAGGATTCGGTTTCGCTTTTCCGCAAGGATCTCCATACCTTCCACTTGTGAACAAAGCACTGTTGGATTTATTTGAATCCGGAAAACAGAGGGAACTGGAGAACAGAATGCTTGCATCAGAGAAATGTGAAGAGTCTGAACCGGACACCGAAACTGCCAGTCTTAGCCCAAACAGCTTCTGGGCCTTGTTCACTTTGACAGCAGGTACATCAACAATTTCCCTCTTGATTTATGTCACCGGCACCAATTGGTTAACCTCCGCGGTGATTGAACAATTGGGACAAGCCAAGAGACGACTCTCAAGAAAAGATAGTCATGTTGCAGAAAGTCCTGTGAACTCTCCACATTCAGATTCACATGTTATGCAACTTCCTCAAGCTTGA 2529 0.3974 MSMVKIVLGTAIEVNKGIVGVVADYNDRSGKEEIVAIKMALEDFYHYTNQSFGLHIRDSHGDPLKAALAARDLIDKEQVQAIIGPQTWEETTLIAELCNQNMTPLLSLADVTPNWATSKWPFMVQTSPNALKQMKAVSAIVQSWDWYSVNIIYEDKDASSTESLSNIYLALTEAGITISNLLSVPPFPSSSLSKDLENLRDGHCRVFVVVSLSLNLAINLFETASKMDMVGKDYVWIITDPFTSLVHSLNASTISSMQGIIGVKSYFQENGKKHEDFYRKFRRKFSLDYPQELNNEPGTFAAHAYDAAWTLALAMSQTNNNEGGKFLMNKILHSNFLGLKGRIQFNDHTLDPTQTFQIINVIGKGYKEIGFWSNGLGFSSNIGQHDVSYSSSMKELGQVMWPGRPWETPRGWALPTIEKPLRVGVPALSTLKQFINITHDQFQGFTIDLFKATMDLMPYHVPYKFYAFNDTYDELVRQIYLKNFDAVIDVTIISYRYQYAEFTQPYTDPGVVMVVPLKSKTGHRAWLFVKPFTKTMWILIVLVIIYNVFVLWMLERNHFCELKGSILKQYGNIAWLAMTPLVNLNDIGDKLHNNLSRVAMVVWLFVALIIMQTYTANLTSMLTVERLEPTIGDVDQLRNNNAMVGYSTGSFLKNYLHDVLHFNPANIRQFRSHEEFAEALRRKEIAAVFIEAPGAKIFLAKYCKEFIQAGPMYKIGGFGFAFPQGSPYLPLVNKALLDLFESGKQRELENRMLASEKCEESEPDTETASLSPNSFWALFTLTAGTSTISLLIYVTGTNWLTSAVIEQLGQAKRRLSRKDSHVAESPVNSPHSDSHVMQLPQA 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03084 842 Gene3D - 27 354 - -
Arst7g03084 842 FunFam Glutamate receptor 525 665 - -
Arst7g03084 842 Gene3D - 524 659 - -
Arst7g03084 842 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 19 797 IPR015683 -
Arst7g03084 842 Pfam Ligand-gated ion channel 752 784 IPR001320 GO:0015276|GO:0016020
Arst7g03084 842 PIRSF IGluLR_plant 2 840 IPR017103 -
Arst7g03084 842 CDD PBP1_GABAb_receptor_plant 19 382 IPR044440 -
Arst7g03084 842 SMART GluR_14 420 755 IPR001320 GO:0015276|GO:0016020
Arst7g03084 842 SUPERFAMILY Periplasmic binding protein-like I 19 412 IPR028082 -
Arst7g03084 842 CDD GluR_Plant 419 753 - -
Arst7g03084 842 Gene3D - 129 374 - -
Arst7g03084 842 Pfam Receptor family ligand binding region 36 362 IPR001828 -
Arst7g03084 842 Pfam Bacterial extracellular solute-binding proteins, family 3 439 751 IPR001638 -
Arst7g03084 842 SUPERFAMILY Periplasmic binding protein-like II 398 751 - -
Arst7g03084 842 FunFam Glutamate receptor 416 524 - -
Arst7g03084 842 FunFam Glutamate receptor 133 295 - -
Arst7g03084 842 MobiDBLite consensus disorder prediction 816 842 - -
Arst7g03084 842 Gene3D - 417 523 - -
Arst7g03084 842 MobiDBLite consensus disorder prediction 822 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03084 Arst-Chr7 77249837 77260309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03084 13 842 Ion Channels AT5G11180 31.257 7.99e-127 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03084 - - gmx:100799573 1056.2