Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02953 ATGGGCTACACTGTTGTTATTGTTGGGTTATGGACATGGTGTTGTGATCTTTACATGTCCTTTGCTATGGCACAACACGTGTTTAATAGATTTTCATTGGTGGCTTCGGTGGAACCCCCACTCATTAATGTTAAAAACATTAGTTATCTAAAATTCTCTGCAGTTACTCAACTGCTGGACTCATATTTTCTTCTTGTGCTTCTTCGAGGCCCAAATCCAATCCACCAAATGGATCAGAAATTTGATTCTGTGAAAGACCTTTCTCTCATTTCAGAGAAGAACTGGTGCATTAAAGTAAGAATTTTGAGGATGTGGAAGGTTCCCTCATATGAAAAGAGCTACTCGCAACCTTCAGTGGAGTTGGTTGTCATTGACAAAGATGGAACTCGGATCCATTGTTTCATCCGGTCTGTCCATTACCGGCTTTTTGAACCTATCCTTGAGGAGGGAAAGGTGTTTGTTGTGGGCAACTTCGCAATGGACTCAAACACACAGAAATACAGACCCACCAAGCTTAGCATGCGGATCATATTTAAGAGGGACACATTGGTGTCTGGTGCTGATGACATGGATATTCCAATTGAGTCATTTGATTTCGTGGCAACCAAGGAAATCTTATCATCCGTTAAGGATGACTTATATCTTATTGATTTTGTTGGTCTACTGTCCGCAAAGAGTGAGTTGATTCCTTTTGAATATAGGAATCGGAAGTCACATTACATGAAAATCGAGCTTGATGATCTGAGTGGCAGTGAGAAGCTTTCATGCACCTTGTGGGAAAATTATGCCTCTGAATTGATAACTCTTCTTGATGCGAACAAGGCCACTGAATTTATAATTGTGCTCCAATTTGCCAAGATGAAGTTCTACAATGGTGTTATGACTATAACCAACACAAACTACACCACAAGGCTCACGGTTAATGCTAATCTTGAAGTGGTTAAGAAATTCTGTCAAAACAAGCACAGCACCAGCGTTGAAGTTATTGGCCGGGTTGTGAGGCATTCTCCATCTGAAGATTTTCTCAGCCTTACCCCTTATGCTACCATACATCAAATAAAGGAAACTCTTGAGAAATCAACCTTCGTCACATGTGGAACGGTAATCGACATTGACAGGGATCATGCATGGTGGTACAAGGCTTGCAGGCAATGCACACAAGGACTGGAGGCACTTACTGACCAATTTTATTGTGCAAAGTGCGATGTTTACTCTACAGTTTTTGCCCCCAGGTTCTGCATTCAGGTTCGTGTTGGTGATGAGTCAGATACCGCAACTTTTGTTCTATTTGAGAATTGTGCGTCAAAGTTCTTAGGTCTAACTGCCGCTGAGATCCGCACCAGACTGCTTGCTAGGGGATATGGAAGAGACCATTTCCCAGATGAGCTTAATACACTGATTGGGAGGACACTTCTGTTCAAGCTTACTGTTAGGCATGATAGCTTAAATAAATTTCAGCCATGCGTGATTACCGTTTCAAGGATATGTTCTGACCCAGACATTATCTCCTCACTTGCTTTAGAAAAGAACATTAAATTGGATGCACTGCAGAAATTGACCACGGCTGCGGTTGTTCGAAGCAGTGACTTGGTTGGGTCTGAGAGCATACTCGGCGTCCGTGGATCCACCACCACTCCGAGTCCCAATTCTGATGCAGTTTCTGGTCACGGGGCTGCCCACGTGGTTACACATACTCCTGTTAAGCGGGTTTGCATTAGATCCGGCGGCGACTTCTCATCCCGTGCCACACCCTCAGCCTCCAAGAGTCTCCTCCCTGCCTTTGAGAGCTGCGTCCTAGGGAATGTCACCAACCCTGATGCAGGGGACATATGA 1833 0.4392 MGYTVVIVGLWTWCCDLYMSFAMAQHVFNRFSLVASVEPPLINVKNISYLKFSAVTQLLDSYFLLVLLRGPNPIHQMDQKFDSVKDLSLISEKNWCIKVRILRMWKVPSYEKSYSQPSVELVVIDKDGTRIHCFIRSVHYRLFEPILEEGKVFVVGNFAMDSNTQKYRPTKLSMRIIFKRDTLVSGADDMDIPIESFDFVATKEILSSVKDDLYLIDFVGLLSAKSELIPFEYRNRKSHYMKIELDDLSGSEKLSCTLWENYASELITLLDANKATEFIIVLQFAKMKFYNGVMTITNTNYTTRLTVNANLEVVKKFCQNKHSTSVEVIGRVVRHSPSEDFLSLTPYATIHQIKETLEKSTFVTCGTVIDIDRDHAWWYKACRQCTQGLEALTDQFYCAKCDVYSTVFAPRFCIQVRVGDESDTATFVLFENCASKFLGLTAAEIRTRLLARGYGRDHFPDELNTLIGRTLLFKLTVRHDSLNKFQPCVITVSRICSDPDIISSLALEKNIKLDALQKLTTAAVVRSSDLVGSESILGVRGSTTTPSPNSDAVSGHGAAHVVTHTPVKRVCIRSGGDFSSRATPSASKSLLPAFESCVLGNVTNPDAGDI 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02953 610 SUPERFAMILY Nucleic acid-binding proteins 197 319 IPR012340 -
Arst7g02953 610 CDD RPA1_DBD_C 350 483 IPR047192 -
Arst7g02953 610 Gene3D - 342 504 IPR012340 -
Arst7g02953 610 CDD RPA1_DBD_B_like 217 317 - -
Arst7g02953 610 Pfam Domain of unknown function DUF223 120 202 IPR003871 -
Arst7g02953 610 Pfam Replication factor-A C terminal domain 364 495 IPR013955 -
Arst7g02953 610 PANTHER OS03G0429900 PROTEIN 91 561 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst7g02953 610 Gene3D - 190 328 IPR012340 -
Arst7g02953 610 CDD RPA1_DBD_A_like 96 184 - -
Arst7g02953 610 SUPERFAMILY Nucleic acid-binding proteins 80 189 IPR012340 -
Arst7g02953 610 SUPERFAMILY Nucleic acid-binding proteins 345 496 IPR012340 -
Arst7g02953 610 Gene3D - 79 186 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02953 Arst-Chr7 74831826 74844665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02953 92 492 Core DNA Replication Machinery Family AT5G08020 21.934 3.30e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02953 - - adu:107458794 1024.23