Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02918 ATGAAGATTCAGTGCAACGTGTGTGAGGCTGCTGAGGCTAAAGTTCTTTGCTGTGCTGATGAGGCTGCGCTTTGTTGGGAGTGTGATGAGAAGGTTCATGCTGCTAACAAGCTCGCTAGCAAGCACCAGAGGGTTCCACTTTCCATGTCTTCTTCTCACATGCCCAAATGTGATATTTGTCAGGAAGCATTTGGCTATTTCTTCTGTCTAGAGGATCGAGCTTTACTGTGTCGAAAGTGTGATGTGGCAATACACACGGCGAATACTTATGTCTCCGGTCATCAGAGGTTTCTTCTCACTGGTGTAAGAGTAGGTCTAGAAGCAACCGAGCCCGGTGGTACTTCTTCAACTTCTTTGAAGTCGGATTCTGGGGAGAAAGCTTCCGACACTAAGTCCTCTTCTGTCTCCAGAAAGGTGTCGACGATGCCCCAGTCGTCGGATTACAATGAAATGTTACCCCTTGATGCTGGGGGAGTTGGCGAGATGCCTCCGGCTAAGGAGTCTTATGGTGGTGGTTCTACTGCCGGAAATATCTCACCGTGGCCGATCGAAGAATTCCTTGGCCTAAATGATTTCGGTCAAGGTTATAATTACATGGAAGGATCATCAAAGGCTGATAGTGGTAAGCTTGGGGATTCTGATTCTCCGGTCTTAAGATCCGTCGAAGAGGAAATGGGAATGGAGGACGATGATGAGTACCTGAGCCGCGTTCCGGATTCATCGTCATATGCTGTTCTCCCATGCAAGAGACTCGGTATTCGAGGCGGCGGAGGCACCACCTTTGAGTTGGTTTCTTCTCTGGTCCCTACCCTCATAACTTAG 822 0.4878 MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSMSSSHMPKCDICQEAFGYFFCLEDRALLCRKCDVAIHTANTYVSGHQRFLLTGVRVGLEATEPGGTSSTSLKSDSGEKASDTKSSSVSRKVSTMPQSSDYNEMLPLDAGGVGEMPPAKESYGGGSTAGNISPWPIEEFLGLNDFGQGYNYMEGSSKADSGKLGDSDSPVLRSVEEEMGMEDDDEYLSRVPDSSSYAVLPCKRLGIRGGGGTTFELVSSLVPTLIT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02918 273 SMART bboxneu5 4 47 IPR000315 GO:0008270
Arst7g02918 273 SMART bboxneu5 52 99 IPR000315 GO:0008270
Arst7g02918 273 CDD Bbox1_BBX-like 5 47 - -
Arst7g02918 273 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 205 - -
Arst7g02918 273 Gene3D Classic Zinc Finger 1 92 - -
Arst7g02918 273 MobiDBLite consensus disorder prediction 110 148 - -
Arst7g02918 273 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Arst7g02918 273 MobiDBLite consensus disorder prediction 109 176 - -
Arst7g02918 273 FunFam B-box zinc finger protein 22 1 93 - -
Arst7g02918 273 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Arst7g02918 273 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Arst7g02918 273 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02918 Arst-Chr7 73953541 73955901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02918 1 218 C2C2-CO-like Transcription Factor Family AT1G78600 55.365 8.15e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Arst7g02918 zf-B_box 6e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02918 7 73953541 73955901 Arst7g02918 7 73953541 73955901 ECH