Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02678 ATGTCTTCTTCGGAGAATATGGCAGAAGAGGAATCAAAACCATTGAACTTCATACCAGAGGTTATACTCAAGAAGCGAAAAAGCAACGAAGCATGGGCTCTTAGGAAAAAGGCTCAATTAGAGCGCTCCAACTTCCAATCTAACAAGAACAAGGACGCTACCATTAAAAAGCCCGAGGATTTTGTTATTCAATATCGCAACATGGAGCTGGACCTTATTAGAATGAAGCGCAGAGTAAAGAGGAAACTTCCACAGCTGAACTCAGACTCCAAGCCCTTAATTGTCATTCGGATTCACGGGAAAAATGATATGCATCCGAAAACAAGAAAAAATTTGTACAGCTTGGGGTTGAGAAGAGTATTCAATGCTGTCTTTTTGAAGCCATCAGATGGAGTGTTAGCCAAGTTGCAGAGGGTGGAACCATTTGTTACCTATGGATACCCAAATCTTAAGAGCATAAAGGAGCTAATCTACAAGAAGGGGCACATGAAAATAGAGAAGCGGAAAGTTCCATTGACAGATAATAACATTGTTGAGCAGGAATTGGGGAAGTATGGTATTGTATGCATAGAAGACATGGTGCATCAGATATATAATGTTGGTCCACACTTTAAGGAAGTTATCCAACTTATGTGGCCCTTCGAACTCAACAAACCAGTCGGAGGATTGACAGGATCAAAAACCCTTTTCAAGGATGGTGGAGACTCTGGGAATCGGGAGGATGTCATCAACGAATTAGTCTCTAAAATGAATTAA 756 0.4087 MSSSENMAEEESKPLNFIPEVILKKRKSNEAWALRKKAQLERSNFQSNKNKDATIKKPEDFVIQYRNMELDLIRMKRRVKRKLPQLNSDSKPLIVIRIHGKNDMHPKTRKNLYSLGLRRVFNAVFLKPSDGVLAKLQRVEPFVTYGYPNLKSIKELIYKKGHMKIEKRKVPLTDNNIVEQELGKYGIVCIEDMVHQIYNVGPHFKEVIQLMWPFELNKPVGGLTGSKTLFKDGGDSGNREDVINELVSKMN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02678 251 PANTHER 60S RIBOSOMAL PROTEIN L7 15 251 IPR039699 -
Arst7g02678 251 NCBIfam 60S ribosomal protein uL30 19 251 IPR005998 GO:0000463|GO:0003735|GO:0022625
Arst7g02678 251 CDD Ribosomal_L7_archeal_euk 93 251 IPR035808 -
Arst7g02678 251 Gene3D - 93 197 IPR036919 -
Arst7g02678 251 Gene3D - 198 251 IPR036919 -
Arst7g02678 251 Pfam Ribosomal L30 N-terminal domain 18 82 IPR012988 -
Arst7g02678 251 FunFam 60S ribosomal protein L7 92 196 - -
Arst7g02678 251 Pfam Ribosomal protein L30p/L7e 93 143 IPR016082 -
Arst7g02678 251 SUPERFAMILY Ribosomal protein L30p/L7e 94 251 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02678 Arst-Chr7 68997523 69000215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02678 7 251 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 54.217 4.63e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02678 K02937 - gmx:100500005 379.407