LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst7g02678	ATGTCTTCTTCGGAGAATATGGCAGAAGAGGAATCAAAACCATTGAACTTCATACCAGAGGTTATACTCAAGAAGCGAAAAAGCAACGAAGCATGGGCTCTTAGGAAAAAGGCTCAATTAGAGCGCTCCAACTTCCAATCTAACAAGAACAAGGACGCTACCATTAAAAAGCCCGAGGATTTTGTTATTCAATATCGCAACATGGAGCTGGACCTTATTAGAATGAAGCGCAGAGTAAAGAGGAAACTTCCACAGCTGAACTCAGACTCCAAGCCCTTAATTGTCATTCGGATTCACGGGAAAAATGATATGCATCCGAAAACAAGAAAAAATTTGTACAGCTTGGGGTTGAGAAGAGTATTCAATGCTGTCTTTTTGAAGCCATCAGATGGAGTGTTAGCCAAGTTGCAGAGGGTGGAACCATTTGTTACCTATGGATACCCAAATCTTAAGAGCATAAAGGAGCTAATCTACAAGAAGGGGCACATGAAAATAGAGAAGCGGAAAGTTCCATTGACAGATAATAACATTGTTGAGCAGGAATTGGGGAAGTATGGTATTGTATGCATAGAAGACATGGTGCATCAGATATATAATGTTGGTCCACACTTTAAGGAAGTTATCCAACTTATGTGGCCCTTCGAACTCAACAAACCAGTCGGAGGATTGACAGGATCAAAAACCCTTTTCAAGGATGGTGGAGACTCTGGGAATCGGGAGGATGTCATCAACGAATTAGTCTCTAAAATGAATTAA	756	0.4087	MSSSENMAEEESKPLNFIPEVILKKRKSNEAWALRKKAQLERSNFQSNKNKDATIKKPEDFVIQYRNMELDLIRMKRRVKRKLPQLNSDSKPLIVIRIHGKNDMHPKTRKNLYSLGLRRVFNAVFLKPSDGVLAKLQRVEPFVTYGYPNLKSIKELIYKKGHMKIEKRKVPLTDNNIVEQELGKYGIVCIEDMVHQIYNVGPHFKEVIQLMWPFELNKPVGGLTGSKTLFKDGGDSGNREDVINELVSKMN	251

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst7g02678	251	PANTHER	60S RIBOSOMAL PROTEIN L7	15	251	IPR039699	-
	Arst7g02678	251	NCBIfam	60S ribosomal protein uL30	19	251	IPR005998	GO:0000463\|GO:0003735\|GO:0022625
	Arst7g02678	251	CDD	Ribosomal_L7_archeal_euk	93	251	IPR035808	-
	Arst7g02678	251	Gene3D	-	93	197	IPR036919	-
	Arst7g02678	251	Gene3D	-	198	251	IPR036919	-
	Arst7g02678	251	Pfam	Ribosomal L30 N-terminal domain	18	82	IPR012988	-
	Arst7g02678	251	FunFam	60S ribosomal protein L7	92	196	-	-
	Arst7g02678	251	Pfam	Ribosomal protein L30p/L7e	93	143	IPR016082	-
	Arst7g02678	251	SUPERFAMILY	Ribosomal protein L30p/L7e	94	251	IPR036919	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst7g02678	Arst-Chr7	68997523	69000215	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst7g02678	7	251	Cytoplasmic Ribosomal Protein Gene Family	AT1G80750	54.217	4.63e-86	254

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst7g02678	K02937		-	gmx:100500005	379.407

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