Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02677 ATGGCAGAAGAGGAATCAAAACCATTGAACTTCATACCAGAGGTTATACTCAAGAAGCGAAAAAGCAACGAAGCATGGGCTCTTAGGAAAAAGGCTCAATTAGAGCGCTCCAACTTCCAATCTAACAAGAACAAGGACGCTACCATTAAAAAGCCCGAGGATTTTGTTATTCAATATCGCAACATGGAGCTGGACCTTATTAGAATGAAGCGCAGAGTAAAGAGGAAACTTCCACAGCTGAACTCAGACTCCAAGCCCTTAATTGTCATTCGGATTCACGGGAAAAATGATATGCATCCGAAAACAAGAAAAAATTTGTACAGCTTGGGGTTGAGAAGAGTATTCAATGCTGTCTTTTTGAAGCCATCAGATGGAGTGTTAGCCAAGTTGCAGAGGGTGGAACCATTTGTTACCTATGGATACCCAAATCTTAAGAGCATAAAGGAGCTAATCTACAAGAAGGGGCACATGAAAATAGAGAAGCGGAAAGTTCCATTGACAGATAATAACATTGTTGAGCAGGAATTGGGGAAGTATGGTATTGTATGCATAGAAGACATGGTGCATCAGATATATAATGTTGGTCCACACTTTAAGGAAGTTATCCAACTTATGTGGCCCTTCGAACTCAACAAACCAGTCGGAGGATTGACAGGATCAAAAACCCTTTTCAAGGATGGTGGAGACTCTGGGAATCGGGAGGATGTCATCAACGAATTAGTCTCTAAAATGAATTAA 738 0.4092 MAEEESKPLNFIPEVILKKRKSNEAWALRKKAQLERSNFQSNKNKDATIKKPEDFVIQYRNMELDLIRMKRRVKRKLPQLNSDSKPLIVIRIHGKNDMHPKTRKNLYSLGLRRVFNAVFLKPSDGVLAKLQRVEPFVTYGYPNLKSIKELIYKKGHMKIEKRKVPLTDNNIVEQELGKYGIVCIEDMVHQIYNVGPHFKEVIQLMWPFELNKPVGGLTGSKTLFKDGGDSGNREDVINELVSKMN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02677 245 PANTHER 60S RIBOSOMAL PROTEIN L7 9 245 IPR039699 -
Arst7g02677 245 Pfam Ribosomal protein L30p/L7e 87 137 IPR016082 -
Arst7g02677 245 CDD Ribosomal_L7_archeal_euk 87 245 IPR035808 -
Arst7g02677 245 Gene3D - 192 245 IPR036919 -
Arst7g02677 245 Gene3D - 87 191 IPR036919 -
Arst7g02677 245 SUPERFAMILY Ribosomal protein L30p/L7e 88 245 IPR036919 -
Arst7g02677 245 Pfam Ribosomal L30 N-terminal domain 12 76 IPR012988 -
Arst7g02677 245 NCBIfam 60S ribosomal protein uL30 13 245 IPR005998 GO:0000463|GO:0003735|GO:0022625
Arst7g02677 245 FunFam 60S ribosomal protein L7 86 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02677 Arst-Chr7 68997522 69000215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02677 1 245 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 54.217 6.84e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02677 K02937 - gmx:100500005 379.407