Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02647 ATGGGGGTTAATGAAGATTTGATGATGAAGGATGATTCATATGCATCATCAGTGATGGAGGAAGAGGATGATGTTCCACTTCCAGGGTTTAGATTCCACCCAACAGATGAAGAACTTGTGAGTTTCTATCTAAAGAGGAAGCTTGACAAGAAACCAATCAGCATCGAACTCATCAAACAGATTGATATCTACAAGTATGATCCTTGGGATCTTCCAAAAGCGAGTGGAAGTGGAGGAGAGAAGGAAGGTTACTTCTTTTGCAAGAGAGGGAGGAAGTATAGGAACAGCATAAGGCCTAACAGAGTCACCAGTTCCGGCTTCTGGAAAGCAACCGGGATAGACAAGCCGGTGTACTCCCATGGCGGCGAAGGAAGCGACTGCATTGGACTCAAGAAGACGCTTGTCTACTACCGCGGCAGCGCCGGAAAAGGTACCAAGACTGATTGGATGATGCACGAGTTTCGCCTCCCTTCTGCCACCACCGAAAACAAAACAAGCCTACTTGCCAACAACAAGAATAATAATAATATCAACAATGCCGATGTTGCCCAAGAAGCTGAAATCTGGACATTGTGTAGAATATTCAAGCGAAATGTGTCACAAAGGAAGCACACAGCAGACTTGAGATCACATTTAGTAACAGCTAATAGTAACAAGCACAAAACCACTAGAACCCATGTTGTTCAATCCAATAATAACAATATTAATCAACATCAAGAATCTTACATCAACTTTGGTGCAACAATCATTGGCCATCACCATTACCATCATCAAAATGAACAGAAGCCAGTGACTAACTACACAGCATGCAATAACAACACTGATCAAATCCAAAGGAACAATAGCAATCATCATCATCATCATCAGTTGAACTATCACCCTTCTTCAGCGGTGGCTACTACTGTGCCACAGCAACAACAACAACAATATCATCATCATCATCAGCTAATGACGGCTCCAGCTTCTAACATGTGGATTAATCCTTCTGCGATGAACGATTTGTTTGCATTTGATGATAACTGGGATGAGCTTGGATCCGTTCTCAAATTCGCTGTTGATACCGGGGCTATTTGCGGAGGGGGTGATGCCGAGTGTGACTACGAGCTTGCTCTTCTGGAAGTTGATGAGAGGGTTTGTTACACTAACCTCGACTCGCCGACCGTCCTGGATTGGATGTGGGTTTACGAGGCGATGTTCACCCGGCTTGGTGTATGGCTCCCGTTTTCTCCATTCGTGCAGCAACTTTTGAGCTAG 1254 0.4434 MGVNEDLMMKDDSYASSVMEEEDDVPLPGFRFHPTDEELVSFYLKRKLDKKPISIELIKQIDIYKYDPWDLPKASGSGGEKEGYFFCKRGRKYRNSIRPNRVTSSGFWKATGIDKPVYSHGGEGSDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSATTENKTSLLANNKNNNNINNADVAQEAEIWTLCRIFKRNVSQRKHTADLRSHLVTANSNKHKTTRTHVVQSNNNNINQHQESYINFGATIIGHHHYHHQNEQKPVTNYTACNNNTDQIQRNNSNHHHHHQLNYHPSSAVATTVPQQQQQQYHHHHQLMTAPASNMWINPSAMNDLFAFDDNWDELGSVLKFAVDTGAICGGGDAECDYELALLEVDERVCYTNLDSPTVLDWMWVYEAMFTRLGVWLPFSPFVQQLLS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02647 417 Pfam No apical meristem (NAM) protein 28 156 IPR003441 GO:0003677|GO:0006355
Arst7g02647 417 Gene3D NAC domain 35 203 IPR036093 GO:0003677|GO:0006355
Arst7g02647 417 ProSiteProfiles NAC domain profile. 26 197 IPR003441 GO:0003677|GO:0006355
Arst7g02647 417 FunFam NAC domain-containing protein 35 35 200 - -
Arst7g02647 417 SUPERFAMILY NAC domain 26 197 IPR036093 GO:0003677|GO:0006355
Arst7g02647 417 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02647 Arst-Chr7 66455668 66459613 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02647 7 197 NAC Transcription Factor Family AT5G39820 58.763 1.36e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst7g02647 NAM 3.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02647 - - adu:107459259 830.476