Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02573 ATGTCACTAAGAAGAGAAACATGGGAAAGCACAAATAATAATCCATGTGATGAAGAAGGAAACTACCAATTACTCTTCCCAAATAATAATGGGTGGGGTAATAGTGGCGGTTTTGATCATCAAAATTATTACTCATCACCTTCTTCTATTCTTGTTCCAAACTCCTCTTATTCTTGTTCTTCTTCTTCTTACCAAGAAGTTCCTCAAAATTGCAACGATTATTATTGTGACACTACCTTCAATGAAATATATAGTTCCTTGCTTGAAGAATTCTCAGCACCACAGATCAATAATAGTGACACTACTACTCCACCACCAATATTAATGAGTGATCATCAAGAGGATTATAATAATAGTAATAATAATAATGAAAATCCACTATTAGTTTCTATGTTGGTGGAAGAAGAGCTTCAAAGCTTGGAGATGCAAAGAGAGTGCAAAATGGAGGCAAGTCAATCATCTTCTCCTCCTGTTTTCAACTCGGAAAGGAAGAACAATAATAGATCAAAGAAGGTTGAGGGCCAACCCTCCAAGAATCTAATGGCTGAGAGGAGAAGAAGGAAGAGATTGAATGATAGGCTCTCCATGCTTAGATCAATTGTCCCCAAGATTAGCAAGATGGACAGAACATCTATACTTGGAGACACCATTGACTACATGAAGGAACTACTAGACAAGATCAATACTTTGAAACAAGAAATCCAAGTGGTGGATGATTCAAATGGCATTTTATCCAATGATAAACACCCAAATGATATTTTAGTGAGAAATTCTCCCAAGTTTGATGTGGAGAGGAGGAATAATAATGGAGACACAAGAGTTGAGATCTGTTGTGGTGGGAAGCCAGGGATGTTGCTATCTACAGTAAACACTTTGGAAGCATTGGGTCTTGACATTCAACACTGTGTTATAAGCTGTTTCAATGACTTCACAATGCAAGCTTCTTGCTCAGAGATGTGGAAAAGGAATTCTCTATATGGAATCTTGCTTTCCCTATCCAAGAAAATGGATGGGACAAAAATGGTATATTGCATCTGTATAAAGCTTAAGCTTTCAGCTTAA 1062 0.3701 MSLRRETWESTNNNPCDEEGNYQLLFPNNNGWGNSGGFDHQNYYSSPSSILVPNSSYSCSSSSYQEVPQNCNDYYCDTTFNEIYSSLLEEFSAPQINNSDTTTPPPILMSDHQEDYNNSNNNNENPLLVSMLVEEELQSLEMQRECKMEASQSSSPPVFNSERKNNNRSKKVEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLDKINTLKQEIQVVDDSNGILSNDKHPNDILVRNSPKFDVERRNNNGDTRVEICCGGKPGMLLSTVNTLEALGLDIQHCVISCFNDFTMQASCSEMWKRNSLYGILLSLSKKMDGTKMVYCICIKLKLSA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02573 353 MobiDBLite consensus disorder prediction 164 189 - -
Arst7g02573 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 236 IPR036638 GO:0046983
Arst7g02573 353 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 86 319 - -
Arst7g02573 353 MobiDBLite consensus disorder prediction 1 20 - -
Arst7g02573 353 Gene3D - 162 241 IPR036638 GO:0046983
Arst7g02573 353 SMART finulus 180 229 IPR011598 GO:0046983
Arst7g02573 353 MobiDBLite consensus disorder prediction 145 163 - -
Arst7g02573 353 MobiDBLite consensus disorder prediction 142 189 - -
Arst7g02573 353 Coils Coil 220 240 - -
Arst7g02573 353 CDD ACT_UUR-ACR-like 272 313 - -
Arst7g02573 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Arst7g02573 353 Pfam Helix-loop-helix DNA-binding domain 180 223 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02573 Arst-Chr7 64684173 64688104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02573 103 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 53.394 6.39e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst7g02573 HLH 7.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02573 - - vra:106764382 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02573 7 64684173 64688104 Arst7g02573 7 64684173 64688104 ECH