Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02530 ATGTCATCAGAAGAAGCAATGCAGTTGCGCATCGAAGACAATCATGTGGTTATGGACAATGGCATACTACAAGTTTATTTGTCGAAACCGAGTGGATTTGTCACCAGAATACAATATAATGGCATTGATAATCTGCTGGAAGCTGGAAATGAAAAATTCAACAGAGGGTATTGGGACGTTGTTTGGAGTAAAGAAGGAAGTACAGGAACTACCGGGACATTTGAGCGGATTGTAGGAACGAGTTTTAATGTTATAGTGGAAAATGAAGAACAAATTGAAATATCGTTCACAAGAATGTGGGATCCGTCTATGGAAGGAAAGCTTTCCCCTCTCAACATTGACAAAAGGTATGTGATGCTACGTGATTCCTCAGGATTCTATTGCTACGCAATATTTGAACACCAAAAGGAGTGGCCTGCTTTCAACATCCCCCAAATCAGGATCGTTTTCAAGCTTCGAGAAGACAAGTTTCATTATATGGCAGTGGCAGATAATAGACAAAGATTCATGCCTCTTCCAGAGGACCGATCACCCGGAAGGGGAAAAGTACTCGTTCCCCCGGAAGCAGTTTTGCTTGCTGACCCTGTGGAGCCAGAGTTCAAGGGGGAGGTGGATGACAAGTACCAATACTCGTGCCAAAACAAAGATCTAAAGGTTCATGGGTGGATAAGTTCTAAATCGGAAAGTGATACAGGCACAGGATTTTGGGTAATCATACCTAGCAATGAGTTTCGTTCGGGTGGCCTCACGAAACAGAATCTTACCTCCCATGTGGGTCCTATTAGCCTCGCCATGTTTCTTAGCGCTCATTACGCAGGAGAGGATCTGGTCCTGAAACTCAGTCCAAACGAACCTTGGAAGAAAGTTTTTGGCCCCACTTTTATATATCTTAATGCTTTGTTGGATGGTGAAGACCCACTTGAGCTTTGGGAGGATGCCAAAGATCAGATGAATGAGGAAGTTGAAAACTGGCCCTATGATTTTCCAGCTTCAGAGGATTTTCAAATTTCTAGCGAAAGGGGCAGTGTAAGTGGCACGTTACTAGTTAGAGACAGGATGTTAAGTGACGATTTCATTGGAGCAAGAGGTGCATACGTAGGACTAGCACCACCTGGTGAAGCTGGATCATGGCAAAGAGAATGCAAGGGATACCAATTCTGGAGTATAGCAGATGATGATGGGTACTTCTCAATTGATAATATACGTAGTGGCGATTACAATATCTATGCATGGGTTCCAGGTTTCATTGGAGACTATCGGAGCAATTATCTCCTCACCATAACTCCAGGCTGTGACAAAAACATTAGTGACATTATTTTTGAGCCTCCAAGAGATGGTCCAACTTTATGGGAAATAGGAATTCCAGATCGTTCTGCTGCCGAGTTCTATGTTCCTGATCCCAATCCAAATTACATAAACAAGCTCTATATCGATCATCCAGATAAGTTTAGGCAATACGGCCTGTGGGAAAGATATTCAGAGTTATACCCAAGGGAAGATTTAATTTATACTGTTGGTGTCAGTGATTACAGCAAAGATTGGTTCTTTGCACATGTCACCAGAAAGATGATGGCACTTACCAAGGCACTACATGGCAAATTAAGTTCGATCTTGCTCATGTGGAGGCAGGTGGAACCTATAAGCTGCGATTGGCTCTTGCAAGTGCAAATGTCTCTGAATTACAGGTTAGAGTGA 1695 0.4289 MSSEEAMQLRIEDNHVVMDNGILQVYLSKPSGFVTRIQYNGIDNLLEAGNEKFNRGYWDVVWSKEGSTGTTGTFERIVGTSFNVIVENEEQIEISFTRMWDPSMEGKLSPLNIDKRYVMLRDSSGFYCYAIFEHQKEWPAFNIPQIRIVFKLREDKFHYMAVADNRQRFMPLPEDRSPGRGKVLVPPEAVLLADPVEPEFKGEVDDKYQYSCQNKDLKVHGWISSKSESDTGTGFWVIIPSNEFRSGGLTKQNLTSHVGPISLAMFLSAHYAGEDLVLKLSPNEPWKKVFGPTFIYLNALLDGEDPLELWEDAKDQMNEEVENWPYDFPASEDFQISSERGSVSGTLLVRDRMLSDDFIGARGAYVGLAPPGEAGSWQRECKGYQFWSIADDDGYFSIDNIRSGDYNIYAWVPGFIGDYRSNYLLTITPGCDKNISDIIFEPPRDGPTLWEIGIPDRSAAEFYVPDPNPNYINKLYIDHPDKFRQYGLWERYSELYPREDLIYTVGVSDYSKDWFFAHVTRKMMALTKALHGKLSSILLMWRQVEPISCDWLLQVQMSLNYRLE 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02530 564 CDD RGL4_N 7 298 - -
Arst7g02530 564 Pfam Polysaccharide lyase family 4, domain III 448 528 IPR029411 -
Arst7g02530 564 SUPERFAMILY Galactose-binding domain-like 445 523 IPR008979 -
Arst7g02530 564 Gene3D - 6 276 IPR014718 GO:0030246
Arst7g02530 564 Gene3D - 336 436 - -
Arst7g02530 564 SUPERFAMILY Starch-binding domain-like 338 433 IPR013784 GO:0030246
Arst7g02530 564 Pfam Rhamnogalacturonate lyase family 8 204 IPR010325 -
Arst7g02530 564 Coils Coil 563 564 - -
Arst7g02530 564 FunFam Rhamnogalacturonate lyase B 336 435 - -
Arst7g02530 564 CDD RGL4_M 339 438 IPR029413 -
Arst7g02530 564 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 12 523 - -
Arst7g02530 564 Pfam Polysaccharide lyase family 4, domain II 361 434 IPR029413 -
Arst7g02530 564 SUPERFAMILY Galactose mutarotase-like 13 298 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02530 Arst-Chr7 63677036 63705902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02530 7 522 Polysaccharide Lyase AT1G09890 65.184 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02530 K18195 - gmx:100815677 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02530 7 63677036 63705902 Arst7g02530 7 63677036 63705902 ECH