Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst7g02503 | ATGGGTGGTACCCTTTCATTCAATCCAATATTCAACCTCACATTTTCCTTTTTCCTCGTCACCATTACCACCACCGTAATTTTCATTGTTGCCGACGCCGACGACGATTCTAGAGAATCTCCCCCTTCATTCCCCAGTTTCCAAAACTCAACGAATAGGGTACCATCCACCAACGGCATATCGACAGGAAACTCCAACAATTTGAACAGAAAATCACAGCCATTAAAGCCAAGCACGATTATCGTGGTTGGTGTCTTAACCACCTTGTTCTCTCTTACATTTATTTTCCTTCTTTACATCAAGCATTGCATCCATAGGAATAACGAAAACCAATCCCATCAAGAAGGTGAGCCACTGCAGAGAAATGACTCTGGCATTGATCGTGGTGTTGTGGAAAAGCTACCGATTTTTCGATTTGGATCGCTAAGAGGACAAAAAGAAGGGTTGGATTGTGCAGTTTGCTTGAACAGGTTCGAGCACACAGATGTTCTTCGTTTGCTTCCAATCTGCAATCATGCTTTCCATGTAGATTGTGTAGACAAGTGGTTCGATGCGCATTCAACTTGCCCTCTTTGTCGCAATAGGGTGGAGCTTAAAGACATCGTCCCGAGGGAACAATTACAAGAACAAGGAGAAAGAGATGAACTAGTGGAGGATATTGAGAGAGGAACCTTTCGGAGAGTCTCGGGGAGGCACTCTTCGGTGTTGGGGGAAAGAGAAGGTGGCTTCTTGGAGATTATTACACATAATTCAAATGAGAAAAAGAATAAAAAAATGAAGTCATCTAGTAGCACGAGGTCATTTCACAGTTCTTCTAGAAGCTTCGGGGGCTTCGTTCGCCCAAGAAAGGACAAAACGTTAATGGCAAGGCAAGGGCAAGAAGGTAATTTTAGTAATAATAACAACAGAGGTAGTAACGCAGAGCACCATAGGTTGCAGCACCAAATTATTATTGATTCACCAGTGGCCTCTTTCGTTAGTTCTAACGGTAAAGGAGAGTCATCATCATCACATCCGCATCATAGATGGAGTGAAGTTCCACAATCGGATCTTTTGTACTTGACTTCTGAGATGATAATCAATGATGCTGCTTCTTCTGTACCTGGGGAAAGAAGAGCAACTCATAACCACATCGTTAGCAATGAGAATAAGAATAATGGCGGTTTGAAGAATTTGAGGAGTTTTTCAGAGGTTACGGGAATGAGCAGGTTCTTAGGAGGAAGCAAAGGAAAAGAAGATGGCAATCAACACTCTGTCGGGGTTGCTACAAGGTGGTCAGCTTGGAGCTCAAGGTCACAACGACCGCGAGCAAATGTTCAGTCGGGATCATAG | 1332 | 0.4347 | MGGTLSFNPIFNLTFSFFLVTITTTVIFIVADADDDSRESPPSFPSFQNSTNRVPSTNGISTGNSNNLNRKSQPLKPSTIIVVGVLTTLFSLTFIFLLYIKHCIHRNNENQSHQEGEPLQRNDSGIDRGVVEKLPIFRFGSLRGQKEGLDCAVCLNRFEHTDVLRLLPICNHAFHVDCVDKWFDAHSTCPLCRNRVELKDIVPREQLQEQGERDELVEDIERGTFRRVSGRHSSVLGEREGGFLEIITHNSNEKKNKKMKSSSSTRSFHSSSRSFGGFVRPRKDKTLMARQGQEGNFSNNNNRGSNAEHHRLQHQIIIDSPVASFVSSNGKGESSSSHPHHRWSEVPQSDLLYLTSEMIINDAASSVPGERRATHNHIVSNENKNNGGLKNLRSFSEVTGMSRFLGGSKGKEDGNQHSVGVATRWSAWSSRSQRPRANVQSGS | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst7g02503 | 443 | MobiDBLite | consensus disorder prediction | 39 | 71 | - | - | |
Arst7g02503 | 443 | FunFam | RING-H2 finger protein ATL43 | 126 | 200 | - | - | |
Arst7g02503 | 443 | MobiDBLite | consensus disorder prediction | 406 | 443 | - | - | |
Arst7g02503 | 443 | MobiDBLite | consensus disorder prediction | 365 | 392 | - | - | |
Arst7g02503 | 443 | Pfam | Ring finger domain | 150 | 193 | IPR001841 | - | |
Arst7g02503 | 443 | MobiDBLite | consensus disorder prediction | 251 | 276 | - | - | |
Arst7g02503 | 443 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 201 | IPR013083 | - | |
Arst7g02503 | 443 | MobiDBLite | consensus disorder prediction | 325 | 344 | - | - | |
Arst7g02503 | 443 | MobiDBLite | consensus disorder prediction | 41 | 71 | - | - | |
Arst7g02503 | 443 | ProSiteProfiles | Zinc finger RING-type profile. | 151 | 193 | IPR001841 | - | |
Arst7g02503 | 443 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 57 | 432 | - | - | |
Arst7g02503 | 443 | SMART | ring_2 | 151 | 192 | IPR001841 | - | |
Arst7g02503 | 443 | MobiDBLite | consensus disorder prediction | 419 | 443 | - | - | |
Arst7g02503 | 443 | SUPERFAMILY | RING/U-box | 130 | 199 | - | - | |
Arst7g02503 | 443 | CDD | RING-H2_EL5-like | 150 | 193 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst7g02503 | Arst-Chr7 | 62866018 | 62867349 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst7g02503 | 75 | 432 | C3H Transcription Factor Family | AT5G05810 | 38.035 | 6.28e-55 | 186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst7g02503 | K19041 | - | cave:132189697 | 240.736 |