Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02500 ATGCTTCCTTTTGGGGGCAGATTCTACGGGTTCGAGAGCTGGCTAGACCATCCTCACCAACACCACTCATCACCCTCTGATGGGTTTTTTGTTCCCGAAGCACCTTTCAAGGCAACGGATCTATTATTCGACGGAGCAGGCAGATCATCCAAACTGGATAATAATAGGAAATCAACGGAAGCCTGCAAGAGCCACAGGGAAGCCGAGAGGAGGCGCAGGCAGCGAATCAACGCTCATCTTTCCACCCTTCGCTCCCTCCTCCCTAACACCGCCAAGGCAGATAAGGCGTCGTTGCTGGCGGAAGTGGTAAAGCACGTGAAGCGGCTAAAGAAAGAGGCCGATGACGTGGCACGAGACCCGTCCAAACCTGACGCCGAAGCAGAAACGTGGCCGTTTCCGGGTGAAGCCGACGAGGCAACACTCAGCTACTGCGACGGAGAACCGAACCTGGTGAAGGCGACGCTGTGCTGCGAGGACCGGCCCGGTCTGAACCGGGACCTGACGCATGCGATTCGGTCAGTTCGAGCGAAAGCGGTTCGGGCCGAGATGATGACGGTTGGGGGCCGGACCAAGAGTGTGGTGGTAATTCAATGGCCAGCAGCGTCTGGTGGTGGTGATTCGAAAGAAGGGGTGGAGGTTGGAGCTCTGGAACGGGCGTTGAAGGCGGTTATTGAGAATCGGGCTTTAGTGGGCTCTGGGATGGGCCGCTTCGTGTTGGGTCAGAAGCGGGCTTGGAATAGTTATGATTCCCCTGATGAGTTTTTGCTAACCAGAGATGCTAGCAAGTAA 789 0.5615 MLPFGGRFYGFESWLDHPHQHHSSPSDGFFVPEAPFKATDLLFDGAGRSSKLDNNRKSTEACKSHREAERRRRQRINAHLSTLRSLLPNTAKADKASLLAEVVKHVKRLKKEADDVARDPSKPDAEAETWPFPGEADEATLSYCDGEPNLVKATLCCEDRPGLNRDLTHAIRSVRAKAVRAEMMTVGGRTKSVVVIQWPAASGGGDSKEGVEVGALERALKAVIENRALVGSGMGRFVLGQKRAWNSYDSPDEFLLTRDASK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02500 262 Coils Coil 99 119 - -
Arst7g02500 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 60 109 IPR011598 GO:0046983
Arst7g02500 262 MobiDBLite consensus disorder prediction 50 72 - -
Arst7g02500 262 MobiDBLite consensus disorder prediction 47 72 - -
Arst7g02500 262 SMART finulus 66 115 IPR011598 GO:0046983
Arst7g02500 262 PANTHER TRANSCRIPTION FACTOR BHLH30 40 235 IPR045847 GO:0003700|GO:0006355
Arst7g02500 262 Pfam Helix-loop-helix DNA-binding domain 62 109 IPR011598 GO:0046983
Arst7g02500 262 Gene3D - 54 117 IPR036638 GO:0046983
Arst7g02500 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 118 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02500 Arst-Chr7 62319200 62321614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02500 57 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 45.977 7.75e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst7g02500 HLH 9.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02500 - - aip:107608273 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02500 7 62319200 62321614 Arst7g02500 7 62319200 62321614 ECH