Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02479 ATGGCATCGAGTAGTTTGCGGAGTGTCTCAAGCCTTCTATGTGCAGAGGACAACAACAGCGTCTTCGACGAAAATGATTACGGCGGTGGTTCGGTGTTGTTGGCGGACACGTGGCATCATCTTAGGCATCAAAACCGNCTCACAAATGGGGATTTGGATTTTGGGGCCAGAAATCATGCCATTCATTGGATTCAAAAGGTTCGAGAGCAATTTGGCTTTGGAGCCCTCTCTGCTTATCTTTCAGTAAATTACTTGGACCGTTTTCTTTCTTCGTATGAACTACCAAAGCAAAGGGTTTGGACAATGCAATTGTTGGCTGTGGCTTGCTTATCTCTTGCAACCAAAATAAATGAGACTGATCCTCCTCTTTGCCTTGATTTGCAGGTTGGTGAATTAAAATTTGTATTTGAAGCAAAAACAATCCAAAGAATGGAGCTTTTGGTACTTAGCACATTGAGATGGAGAATGCAATCAATTACCCCTTTCTCCTTCATTGACTATTTCCTTTACAAGGTCAATGATGATCAAAATCCAACAAGAGATTCAATTATGAGATCCATCCAACTTATACTGAGTACTGTAAAAGGGATTGAATGCTTGGCGTTTAGACCATCAGAGATTGCAGCTGCTATAGCAATAGTTGTGGTAAGGGAAACAAAAACAGTGCACACTGAGAAAGCAATTTCTCTTCTGAATCACCTAGTGGAAAAGGAGAGAGTGTTGAAATGTGTGAAATTAATCCAAGGGTTGTCATCAAAGGATGGTTTTACTAATAAGGACACAAGAAGTGGTTCTGTTTCTGCCCCTTTGATGCCACAAAGTCCAATTGGGGTGTTGGATGGTGTGTGCTTAAGCTACAAAAGTGAGGACACTCATGCTGCTGCTTCATATGCAAACATTAATTCATCTTCACATATTACTAGTCCAGATGCTAATAAAAGGAGGAAGCTAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTCCCATGCAGCACCAGCATAG 1023 0.392 MASSSLRSVSSLLCAEDNNSVFDENDYGGGSVLLADTWHHLRHQNRLTNGDLDFGARNHAIHWIQKVREQFGFGALSAYLSVNYLDRFLSSYELPKQRVWTMQLLAVACLSLATKINETDPPLCLDLQVGELKFVFEAKTIQRMELLVLSTLRWRMQSITPFSFIDYFLYKVNDDQNPTRDSIMRSIQLILSTVKGIECLAFRPSEIAAAIAIVVVRETKTVHTEKAISLLNHLVEKERVLKCVKLIQGLSSKDGFTNKDTRSGSVSAPLMPQSPIGVLDGVCLSYKSEDTHAAASYANINSSSHITSPDANKRRKLNNNNNNNNNNNNNNNNNSHAAPA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02479 340 SMART Cyclin_C_2 159 274 IPR004367 -
Arst7g02479 340 FunFam D6-type cyclin 154 245 - -
Arst7g02479 340 MobiDBLite consensus disorder prediction 302 340 - -
Arst7g02479 340 Coils Coil 314 334 - -
Arst7g02479 340 SMART cyclin_7 62 150 IPR013763 -
Arst7g02479 340 SUPERFAMILY Cyclin-like 141 248 IPR036915 -
Arst7g02479 340 FunFam D2/4-type cyclin 40 153 - -
Arst7g02479 340 SUPERFAMILY Cyclin-like 43 156 IPR036915 -
Arst7g02479 340 ProSitePatterns Cyclins signature. 57 88 IPR006671 -
Arst7g02479 340 PANTHER CYCLINS 57 256 IPR039361 -
Arst7g02479 340 Gene3D - 158 245 - -
Arst7g02479 340 Pfam Cyclin, N-terminal domain 51 156 IPR006671 -
Arst7g02479 340 Gene3D - 50 157 - -
Arst7g02479 340 Pfam Cyclin, C-terminal domain 159 253 IPR004367 -
Arst7g02479 340 CDD CYCLIN_AtCycD-like_rpt2 159 247 - -
Arst7g02479 340 CDD CYCLIN_AtCycD-like_rpt1 56 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02479 Arst-Chr7 61591585 61595709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02479 43 290 Core Cell Cycle Gene Families AT2G22490 51.190 4.62e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02479 K18810 - gmx:100803873 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02479 7 61591585 61595709 Arst7g02479 7 61591585 61595709 ECH