Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02468 ATGGAATTTGACGAGCAAGAAGAGCAAGAGGAGGAACTGGGAATACCAGAGGCACCGCAGTCGCAAGCCACGCAAGCGAGTTACGACTCACTCGGAAACTCAGCGAAACTCACCGGGGATGGAACCGCCGCGTCAGGCTTTGGACGAAAAGGAGCAGCAGCGTCGTCGGTGAGGTACCGTGAATGTCAGAAGAACCACGCCGTCAGCTTCGGCGGCCACGCCGTAGACGGTTGCTGCGAGTTCATGGCCGCCGGAGAGGACGGCTCGCTGGAGGCCGTCATCTGCGCTGCCTGTAACTGCCACCGCAACTTTCACCGCAAAGAGATCGACGGCGACATAAGAGGTGGAAGCGGCGCCGGGACCTTGCACCACCACCGTCCTCAACCTCCGCCGCATCTCCACCAATTCTCCCCTTACTACCACCACCGCGGTCCGCCGTACCCGGCAGGGTACCTTCACCACCTTGCGACACCTCCGATGGCTCAGCACCGTCCTCTAGCACTTCCTGCAGCGGTTTCCGGCGGTGGACTAAGCAGAGATGAGGAGGACATGTCGAACCCTAGCAGCAGCGGTGGCGGCGGCGGCGGCGGTGGCTGTGGCGGAAGCGGTTCTTCAAAGAAAAGGTTCAGGACGAAGTTCACGCAGGAACAGAAGGATAAGATGCTTGCTTTCGCTGAACAAGTTGGATGGCGGATCCAGAAGCAAGATGAAGTCATGGTTGAACAGTTCTGTGCCGAAGCTTGCGTTAAGAGGAGCGTTCTCAAGGTTTGGATGCACAATAACAAGAACACTCTTGAATATGCGAGAGAAATTGTGTGTGCCTGTGTGGGAGAGAGAAGAGAGACGACGAAGAAGAAAGACAGCCCCCCGGGGGGGTGCTGCGCCCCCGTGACCATACCGCTCCATCATTGCCTAAAAATGAAAGATAATAATGCTACAGAATAA 945 0.5704 MEFDEQEEQEEELGIPEAPQSQATQASYDSLGNSAKLTGDGTAASGFGRKGAAASSVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGSLEAVICAACNCHRNFHRKEIDGDIRGGSGAGTLHHHRPQPPPHLHQFSPYYHHRGPPYPAGYLHHLATPPMAQHRPLALPAAVSGGGLSRDEEDMSNPSSSGGGGGGGGCGGSGSSKKRFRTKFTQEQKDKMLAFAEQVGWRIQKQDEVMVEQFCAEACVKRSVLKVWMHNNKNTLEYAREIVCACVGERRETTKKKDSPPGGCCAPVTIPLHHCLKMKDNNATE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02468 314 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 35 265 - -
Arst7g02468 314 MobiDBLite consensus disorder prediction 18 40 - -
Arst7g02468 314 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
Arst7g02468 314 MobiDBLite consensus disorder prediction 1 48 - -
Arst7g02468 314 FunFam Zinc-finger homeodomain protein 2 200 267 - -
Arst7g02468 314 Pfam ZF-HD protein dimerisation region 57 109 IPR006456 -
Arst7g02468 314 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
Arst7g02468 314 SUPERFAMILY Homeodomain-like 193 264 IPR009057 -
Arst7g02468 314 MobiDBLite consensus disorder prediction 170 208 - -
Arst7g02468 314 NCBIfam homeobox domain, ZF-HD class 206 263 IPR006455 -
Arst7g02468 314 Gene3D - 194 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02468 Arst-Chr7 61268918 61273138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02468 1 266 ZF-HD Transcription Factor Family AT4G24660 48.496 4.36e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Arst7g02468 ZF-HD_dimer 1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02468 - - gmx:100776421 352.058