Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02467 ATGGAATTTGACGAGCAAGAAGAGCAAGAGGAGGAACTGGGAATACCAGAGGCACCGCAGTCGCAAGCCACGCAAGCGAGTTACGACTCACTCGGAAACTCAGCGAAACTCACCGGGGATGGAACCGCCGCGTCAGGCTTTGGACGAAAAGGAGCAGCAGCGTCGTCGGTGAGGTACCGTGAATGTCAGAAGAACCACGCCGTCAGCTTCGGCGGCCACGCCGTAGACGGTTGCTGCGAGTTCATGGCCGCCGGAGAGGACGGCTCGCTGGAGGCCGTCATCTGCGCTGCCTGTAACTGCCACCGCAACTTTCACCGCAAAGAGATCGACGGCGACATAAGAGGTGGAAGCGGCGCCGGGACCTTGCACCACCACCGTCCTCAACCTCCGCCGCATCTCCACCAATTCTCCCCTTACTACCACCACCGCGGTCCGCCGTACCCGGCAGGGTACCTTCACCACCTTGCGACACCTCCGATGGCTCAGCACCGTCCTCTAGCACTTCCTGCAGCGGTTTCCGGCGGTGGACTAAGCAGAGATGAGGAGGACATGTCGAACCCTAGCAGCAGCGGTGGCGGCGGCGGCGGCGGTGGCTGTGGCGGAAGCGGTTCTTCAAAGAAAAGGTTCAGGACGAAGTTCACGCAGGAACAGAAGGATAAGATGCTTGCTTTCGCTGAACAAGTTGGATGGCGGATCCAGAAGCAAGATGAAGTCATGGTTGAACAGTTCTGTGCCGAAGCTTGCGTTAAGAGGAGCGTTCTCAAGGTTTGGATGCACAATAACAAGAACACTCTTGGTAAAGTTTGGCTGAATTTGGCAAGTTTTGGCAAAGTCTGA 837 0.5747 MEFDEQEEQEEELGIPEAPQSQATQASYDSLGNSAKLTGDGTAASGFGRKGAAASSVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGSLEAVICAACNCHRNFHRKEIDGDIRGGSGAGTLHHHRPQPPPHLHQFSPYYHHRGPPYPAGYLHHLATPPMAQHRPLALPAAVSGGGLSRDEEDMSNPSSSGGGGGGGGCGGSGSSKKRFRTKFTQEQKDKMLAFAEQVGWRIQKQDEVMVEQFCAEACVKRSVLKVWMHNNKNTLGKVWLNLASFGKV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02467 278 FunFam Zinc-finger homeodomain protein 2 200 267 - -
Arst7g02467 278 SUPERFAMILY Homeodomain-like 193 267 IPR009057 -
Arst7g02467 278 MobiDBLite consensus disorder prediction 18 40 - -
Arst7g02467 278 Pfam ZF-HD protein dimerisation region 57 109 IPR006456 -
Arst7g02467 278 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
Arst7g02467 278 MobiDBLite consensus disorder prediction 1 48 - -
Arst7g02467 278 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
Arst7g02467 278 NCBIfam homeobox domain, ZF-HD class 206 263 IPR006455 -
Arst7g02467 278 Gene3D - 194 266 - -
Arst7g02467 278 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 35 265 - -
Arst7g02467 278 MobiDBLite consensus disorder prediction 170 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02467 Arst-Chr7 61260656 61273133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02467 1 265 ZF-HD Transcription Factor Family AT4G24660 48.679 8.35e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Arst7g02467 ZF-HD_dimer 8.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02467 - - gmx:100776421 356.295