Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02438 ATGCGGATCCTTGAAAATATGGATCATGGAGAACTCTCAAACGGTTTCCCTCATAATCAGAATCAGAATCCAACTACTACTCCTCCTCCTTCATCTAATAATAACCTTCCTTCTTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGATCCGGAAGCGGAAGTAATAGCCTTATCCCCAAAGACTCTAATGGCTACAAACAGGTTCTTGTGTGAAACCTGTGGGAAGGGTTTCCAAAGGGATCAAAACCTTCAACTCCATAGAAGAGGACACAACCTTCCATGGAAGCTAAAACAAAGAACAAATAAAGAACCAAAGAAGCGTGTATACGTGTGTCCGGAGAAAACATGTGTCCACAACCACCCTTCAAGGGCTTTGGGAGACTTGACCGGAATTAAGAAGCACTTTTGCAGGAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAATGCTCGAAGCGTTACGCGGTTCAGTCTGATTGGAAAGCCCACTCCAAAATCTGTGGTACAAGAGAATACAAGTGTGATTGTGGAACCATCTTTTCACGGAGGGATAGCTTCATAACTCACAGGGCATTTTGTGATGCATTGGCAGAAGAAACAGCTAGGGTAAATGCAGCATCAAGCATAAACAATTCAACATTAGGGGCTAATAATAGTAACAATAACATTATTGGTTACAATAACATGATGATAGGAACCTCCATGGCCCCTCATCATAATAATAATAATAACATGGCAACCCAATTTGCTTCAATTTGCAATAAGCCAATTCCATTCCCTGAAGAAGCCAGAAATAACCAAACAACAACAAGAGGATTATCCCTTTGGATGGACCATCATCATCATCATCGTCAAGAAGCAACGATGGCCACTAATAACAATAATTACCATCTGAACTGGGTATTCGGATCGAAAATTTCGACCAATCCAAGCCAAGATCTAAGTAGCAATACTACTATTACTAGTACTACTACTACATCGCTTAGTGTTCCTTCATTGTATAGCTCACAACATCAACCCCATCAAACATGTGCTTCTTCGTCGTCGGCGAACATGTCGGCGACGGCATTGTTGCAGAAAGCCGCTCAAGTTGGTGCAACCTCATGTGGTCCATCATCATTCTTGGGGGCATTAGGGTTGAAATGCAGCAATGGTAGTGGTCAAGGGCAAGATGGGAATAACAATAAGTTTTGTGGGGTGTATGGTTCAAGTTTGGTGCTAACAAGTAGTAGTAATAATATTAATACAGAGCCAGAGAACAATGAATTGTCACAAATGCTCCCTTCAAAGAGGAGACATGTAATGCCGAATGAGGAGAGTGGAGGAGGGCAAACTAGGGACTTCCTTGGTGTTGGGGGTGCAAACCACCATTTGCCACCCTTCATCAACCAAAGCTTGGATTTGATTTGA 1410 0.4277 MRILENMDHGELSNGFPHNQNQNPTTTPPPSSNNNLPSLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEPKKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASSINNSTLGANNSNNNIIGYNNMMIGTSMAPHHNNNNNMATQFASICNKPIPFPEEARNNQTTTRGLSLWMDHHHHHRQEATMATNNNNYHLNWVFGSKISTNPSQDLSSNTTITSTTTTSLSVPSLYSSQHQPHQTCASSSSANMSATALLQKAAQVGATSCGPSSFLGALGLKCSNGSGQGQDGNNNKFCGVYGSSLVLTSSSNNINTEPENNELSQMLPSKRRHVMPNEESGGGQTRDFLGVGGANHHLPPFINQSLDLI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02438 469 MobiDBLite consensus disorder prediction 1 52 - -
Arst7g02438 469 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Arst7g02438 469 Gene3D Classic Zinc Finger 123 203 - -
Arst7g02438 469 Gene3D Classic Zinc Finger 48 122 - -
Arst7g02438 469 MobiDBLite consensus disorder prediction 13 41 - -
Arst7g02438 469 FunFam protein indeterminate-domain 5, chloroplastic-like 123 202 - -
Arst7g02438 469 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 91 IPR013087 -
Arst7g02438 469 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 26 455 IPR031140 -
Arst7g02438 469 FunFam protein indeterminate-domain 12-like 48 116 - -
Arst7g02438 469 SUPERFAMILY beta-beta-alpha zinc fingers 68 165 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02438 Arst-Chr7 60333692 60336995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02438 35 452 IDZ Gene Family AT1G03840 52.146 1.13e-136 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst7g02438 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02438 K25870 - gmx:100790620 541.962