Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02437 ATGACCGACCTGATCGAGTGTCATCCACCTTCAAGATGCCATCAAACTATCCACCACCGCGTCCTCTGTCTTCTTCTATCTAAACTATCACTACATGTCATCGTAACTAATAATCTGTTTGTTCAAGATGGTGGATCCTATCCACCTCATTTTCTTTTTCTTTTTCTCCTTATCTTTCACACTCCGCTTGCAACGGCACAGCAGCAGGAGTACCCATTGCCTAAGGTAAGAGGTGACAAGACCATGGTCATTGTCCTCCTCGTCCTCGTGGCCGTCTTCTTCGCCCTAGGCCTCCTCTCCATCTACATTCGCCAATGCTCCGAACGTCGGCACCGTGACCAGCTCCACCCTGCTATCCTCTCTGCCACCTACGGTGGAGGCAACAGCGGGGGGCAGCATCATGGCCTTGGCATTGCGGTGGTGGACTCATTTCCATCCTTCATCTACTCCAACGTGAAGAGTCACAAGATCGGGCAGGGGGCGCTAGAATGCGCCGTGTGCCTATGCGAGTTTCAAGATGAAGAAACGCTGCGTTTGATCCCACAATGCTGCCACGTGTTCCACTCCGACTGCATCGATGTCTGGTTCTCCTCCCACTCAACATGTCCAGTCTGCCGTGCAAACCTCACGCCAAAACCACCTGACACGTCATCACCACAATCCCTCGTTGTAAACATTTCGGATCAACCTGATACGAATCCAGTTAACAGTGAGCCAAATATCATTTCCCTGATCAATGATGGCGACCAGAACAATGCAATAATAACAGAGCCGAAGTCTCATCAGGAGATGAGAACTATTTTTAATTTTGATGAAGAGAATGGTTCGGTTCGGTCATTTTATCGTTTTAACTCGGCCGGTCATTTTACGGTTCGACCGGTAGGAACGGTTAGTTGGAGGGTAACATTTCAAACGGAGAGAAGCCAGAAGGAGGGTTATAGGACAAGGAGTGCAGGAAGCACAGAGCCACCATTTATTGGCATGACCAGATTTGAAAGGTTAGAGAAGGGTGAGAGCATTAAAGGAAATGAGGTTGAAGTAGATGGGGGAGAACGGTCTTTTGATCTTCTATTTCCCAAGGGCTCGAGGGATGAGAATTAG 1101 0.4877 MTDLIECHPPSRCHQTIHHRVLCLLLSKLSLHVIVTNNLFVQDGGSYPPHFLFLFLLIFHTPLATAQQQEYPLPKVRGDKTMVIVLLVLVAVFFALGLLSIYIRQCSERRHRDQLHPAILSATYGGGNSGGQHHGLGIAVVDSFPSFIYSNVKSHKIGQGALECAVCLCEFQDEETLRLIPQCCHVFHSDCIDVWFSSHSTCPVCRANLTPKPPDTSSPQSLVVNISDQPDTNPVNSEPNIISLINDGDQNNAIITEPKSHQEMRTIFNFDEENGSVRSFYRFNSAGHFTVRPVGTVSWRVTFQTERSQKEGYRTRSAGSTEPPFIGMTRFERLEKGESIKGNEVEVDGGERSFDLLFPKGSRDEN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02437 366 SMART ring_2 164 205 IPR001841 -
Arst7g02437 366 FunFam E3 ubiquitin-protein ligase ATL6 127 212 - -
Arst7g02437 366 SUPERFAMILY RING/U-box 157 216 - -
Arst7g02437 366 CDD RING-H2_EL5-like 163 206 - -
Arst7g02437 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 212 IPR013083 -
Arst7g02437 366 ProSiteProfiles Zinc finger RING-type profile. 164 206 IPR001841 -
Arst7g02437 366 Pfam Ring finger domain 163 206 IPR001841 -
Arst7g02437 366 PANTHER RING FINGER DOMAIN-CONTAINING 67 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02437 Arst-Chr7 60261086 60262186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02437 53 210 Rapid Response to Elicitors AT3G05200 43.713 2.07e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02437 K10664 - gmx:100815982 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02437 7 60261086 60262186 Arst7g02437 7 60261086 60262186 ECH
Arst7g02437 7 60261086 60262186 Arst8g00984 8 13396690 13398661 PCT