Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02436 ATGACCCAAAACGGCAGTCTTGTCGAACACTACTACATGATCAGTTTCCTCCTCTTTGCCCTTCTCATGCAGAAGCCGCCAGAAGCAACATCTCAGCTGATAACTGCCGCAAAAACCCCAACATATTTGTCTCAAACATCCCCAATAGGACCACCCAACAAAAATTCCATGGTGGCCATCATGATCATCATCGTCTTTATGTTCCTCCTCTCAGCCTTCATCTCGCTCTACTCGCGCCACTGCACCCGTCGCCCAGCCCGCGTACAGTCTCGCAGGCTGAATATCGCCATGGTAGCGGACGAACTTAACGATCGCCGATCCCACAGTGAGTGTGTTGGCCTCAGCCAAGAGACAATCGAAACATTCCCTACTTGTCTCTACTCCTCCGTGAAGGGCCACAAGATCGGCACGTGCGCATTGGCATGCGCGGTGTGCATAAGCGAGTTCGAGGACCAAGAGACCCTTCGCTTGATCCCCAAATGCAGCCACGTGTTTCACCCAACCTGCATCGACGCCTGGCTGGCATCTCACTCCACGTGTCCCGTTTGCCGCGCCGACCTCGATCCAACGCAAAACGACGTCCATTCATCTTCCATATTCTCAATTCACATTCCTGATGATGACGTCATCACCGAAATGGAGGAGCAGGGCCAAAGCAACGAACAAGAGGACGCTGCTGCTGATGTTAGGGGCAGGGATCAAAACGACGTCGTCGAACCGTTTTCATCGAAAGGTGATTTGCTACGTAGAAGCCGTACGGTGAACGATGTTATGACAGGCCAAACCCTGCGTTCTTTATTGTTTCCGCGGTCTAACTCGGCCGGAACATCCTTAACCAGGGTTCAGACCGGTGATAAGGATTTTGAAAGGTTTACTCTGAGGTTACCGAGTGGGGTTCGAAGCGAGGTTTTCATGAACTCGAGATTGAAGCGTGCAAAGACTTGTGTGGGATTAGTGAGAATGAGTAGTGGGACAAAGGGGTATAGGACAGGAAGCGTTGGCAACTGCCGCGGCGATTACGAGCGGTGGCGGTTTACTTTGACGCCGCCGTTTTTGACCAAGAATTGGAGTCGGTTAGGGAGAAGATCTGCATCCGCTCAGTGTTTAGGGGTGGAGGTGGATAATAATAATGTTGGTGAGCGACCTTCTGATCTCTTGTTCCCTCCATCGACAGCTTAA 1179 0.5165 MTQNGSLVEHYYMISFLLFALLMQKPPEATSQLITAAKTPTYLSQTSPIGPPNKNSMVAIMIIIVFMFLLSAFISLYSRHCTRRPARVQSRRLNIAMVADELNDRRSHSECVGLSQETIETFPTCLYSSVKGHKIGTCALACAVCISEFEDQETLRLIPKCSHVFHPTCIDAWLASHSTCPVCRADLDPTQNDVHSSSIFSIHIPDDDVITEMEEQGQSNEQEDAAADVRGRDQNDVVEPFSSKGDLLRRSRTVNDVMTGQTLRSLLFPRSNSAGTSLTRVQTGDKDFERFTLRLPSGVRSEVFMNSRLKRAKTCVGLVRMSSGTKGYRTGSVGNCRGDYERWRFTLTPPFLTKNWSRLGRRSASAQCLGVEVDNNNVGERPSDLLFPPSTA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02436 392 Pfam Ring finger domain 141 184 IPR001841 -
Arst7g02436 392 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Arst7g02436 392 CDD RING-H2_EL5-like 142 184 - -
Arst7g02436 392 SMART ring_2 142 183 IPR001841 -
Arst7g02436 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 190 IPR013083 -
Arst7g02436 392 SUPERFAMILY RING/U-box 136 193 - -
Arst7g02436 392 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 232 - -
Arst7g02436 392 FunFam E3 ubiquitin-protein ligase ATL6 102 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02436 Arst-Chr7 60216247 60217425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02436 44 355 Rapid Response to Elicitors AT3G05200 33.436 2.98e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02436 K10664 - gmx:100814384 268.47