Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02326 ATGTCTCACAACAATCACATAACCACCGATTCCCCGCTATCTCGTCGCATAGTTCGTTCCTTCCTGCAATTCCTCAACTCTGTTGAACCAGGGCCTGGGGTTGATGCCGAAGGGATTGAGGTTGCTAGGGAGTGTTTGGCAGAGGCCTTTAAGCTAAACTCTTCTGGTGTAGATGGTGATCCGCAATCTGATTCCTTGATTGACATGTTCAAGAGCCTTGAAGCAAGAAAGCAGCGTGAAACTATCAAGTCAGACCCTAGTCCTATGGATGCTTCTAGTTCATTCTCTGACCATAATCCATCATCCTTTGCTCAAAATCATATGAAGGATCAAGATTGGACACAGGGCACTGACATTTTTGCATCCAAAGATGAACTCTGTGGAAAATTTTTTGCATCTCTGGAGAAAAATCACTATTTTAGGGTGAATCACGATGGAACTGATGACCCAATGCAACTAGAGAAAGCATCTTGTTTATTTGATAATGCTTTTAAGGAGATGGAAAAATCTGGGTCCCCAGTATTAAATCTGAAGAATTTGGCTGAATCACTGAAATCACTAGGTAACAAGGCAATGCAATCCAAGCAATACCATGATGCAATTGAGTTGTATAATTGTGCAATTGCAGTGCATGAAAAAAGTGCTGTTTATTACTGCAACAGGGCAGCAGCTTACACTCAGCTTAAAAAATATGATGAAGCAATCCAAGATTGTCTTAGATCTATTGAGATTGATCCAAACTACAGCAAGGCTTACAGTCGTTTGGGGTTAGTATACTATGCTCAAGGAAACTACAGCTTTGCTATTGATAAAGGGTTCAGAAAAGCCTTGCTATTGGATCCAAATAACGAAGCTGTTAAAGAAAATATACGGGTGGCTGAGCATAAATTGCGAGAAGAGCAACACCATGCAAATCATAATCAGAGTTCAAGATCATCTTGGGAATTTCCGAACCAATCGACAAGAGGATCAAGAAGCCATGGAGTGCCACCTTTTCCATCAGTGCCATTTAACCCAAATGATATAGCAAGCATGTTCAGAGACATGGCTGCAAATGTCACAGGTTCGCACCATGGGTCGCACTCTCAGGAACGGCCAGTGGATGCCAATGCCACAAGTGCTAATGAACCGGAAATAAGAATTGGTGGCAATATTAATTTGAACTTTGATGAAATGTCTGATGATGTAACAGGAGCCTTTAGATCTATGATGGAGATGTTCTCTGGGAGTTCGTCTCAAGGGCAACGACAAGATCATATGAATGGAAGAGCAGCTCCAAACTAA 1284 0.4174 MSHNNHITTDSPLSRRIVRSFLQFLNSVEPGPGVDAEGIEVARECLAEAFKLNSSGVDGDPQSDSLIDMFKSLEARKQRETIKSDPSPMDASSSFSDHNPSSFAQNHMKDQDWTQGTDIFASKDELCGKFFASLEKNHYFRVNHDGTDDPMQLEKASCLFDNAFKEMEKSGSPVLNLKNLAESLKSLGNKAMQSKQYHDAIELYNCAIAVHEKSAVYYCNRAAAYTQLKKYDEAIQDCLRSIEIDPNYSKAYSRLGLVYYAQGNYSFAIDKGFRKALLLDPNNEAVKENIRVAEHKLREEQHHANHNQSSRSSWEFPNQSTRGSRSHGVPPFPSVPFNPNDIASMFRDMAANVTGSHHGSHSQERPVDANATSANEPEIRIGGNINLNFDEMSDDVTGAFRSMMEMFSGSSSQGQRQDHMNGRAAPN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02326 427 Gene3D Immunoglobulin FC, subunit C 1 76 - -
Arst7g02326 427 PANTHER LD24721P 3 418 IPR047150 -
Arst7g02326 427 MobiDBLite consensus disorder prediction 85 101 - -
Arst7g02326 427 Gene3D Tetratricopeptide repeat domain 176 334 IPR011990 GO:0005515
Arst7g02326 427 Coils Coil 283 303 - -
Arst7g02326 427 ProSiteProfiles TPR repeat profile. 181 214 IPR019734 GO:0005515
Arst7g02326 427 MobiDBLite consensus disorder prediction 300 336 - -
Arst7g02326 427 MobiDBLite consensus disorder prediction 408 427 - -
Arst7g02326 427 FunFam Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 76 - -
Arst7g02326 427 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 176 323 - -
Arst7g02326 427 ProSiteProfiles TPR repeat profile. 249 283 IPR019734 GO:0005515
Arst7g02326 427 MobiDBLite consensus disorder prediction 78 101 - -
Arst7g02326 427 MobiDBLite consensus disorder prediction 307 327 - -
Arst7g02326 427 MobiDBLite consensus disorder prediction 353 374 - -
Arst7g02326 427 SUPERFAMILY TPR-like 180 294 IPR011990 GO:0005515
Arst7g02326 427 SMART tpr_5 215 248 IPR019734 GO:0005515
Arst7g02326 427 SMART tpr_5 181 214 IPR019734 GO:0005515
Arst7g02326 427 SMART tpr_5 249 283 IPR019734 GO:0005515
Arst7g02326 427 MobiDBLite consensus disorder prediction 355 370 - -
Arst7g02326 427 Pfam Tetratricopeptide repeat 215 248 IPR001440 GO:0005515
Arst7g02326 427 ProSiteProfiles TPR repeat profile. 215 248 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02326 Arst-Chr7 54719632 54730220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02326 180 316 U-box Gene Family AT3G07370 27.586 2.32e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02326 K16365 - gmx:100775346 573.163