Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02324 ATGTCTCACAACAATCACATAACCACCGATTCCCCGCTATCTCGTCGCATAGTTCGTTCCTTCCTGCAATTCCTCAACTCTGTTGAACCAGGGCCTGGGGTTGATGCCGAAGGGATTGAGGTTGCTAGGGAGTGTTTGGCAGAGGCCTTTAAGCTAAACTCTTCTGGTGTAGATGGTGATCCGCAATCTGATTCCTTGATTGACATGTTCAAGAGCCTTGAAGCAAGAAAGCAGCGTGAAACTATCAAGTCAGACCCTAGTCCTATGGATGCTTCTAGTTCATTCTCTGACCATAATCCATCATCCTTTGCTCAAAATCATATGAAGGATCAAGATTGGACACAGGGCACTGACATTTTTGCAGCATCCAAAGATGAACTCTGTGGAAAATTTTTTGCATCTCTGGAGAAAAATCACTATTTTAGGGTGAATCACGATGGAACTGATGACCCAATGCAACTAGAGAAAGCATCTTGTTTATTTGATAATGCTTTTAAGGAGATGGAAAAATCTGGGTCCCCAGTATTAAATCTGAAGAATTTGGCTGAATCACTGAAATCACTAGGTAACAAGGCAATGCAATCCAAGCAATACCATGATGCAATTGAGTTGTATAATTGTGCAATTGCAGTGCATGAAAAAAGTGCTGTTTATTACTGCAACAGGGCAGCAGCTTACACTCAGCTTAAAAAATATGATGAAGCAATCCAAGATTGTCTTAGATCTATTGAGATTGATCCAAACTACAGCAAGGCTTACAGTCGTTTGGGGTTAGTATACTATGCTCAAGGAAACTACAGCTTTGCTATTGATAAAGGGTTCAGAAAAGCCTTGCTATTGGATCCAAATAACGAAGCTGTTAAAGAAAATATACGGGTGGCTGAGCATAAATTGCGAGAAGAGCAACACCATGCAAATCATAATCAGCTTAGTGTTATACTCTCAGACTACTATGCTTTTGTCCATTGTAATTCACAACCTACTGGTGCCACTGTTGGAAATTCAGCCTCTACATACTACACTTCACAAGTAAATTTGTTAGGTTTCTCACTCCTTCATGTTACTAGACATCCTCCCAAGAACATGAATATGATGATTGAATCTCCTTTCAATAACAAAAAACTTGTTGGGATGATGTTACATATTTTATCTGCAGCTTGCATGTGTGTCTTCCTTGCTTGGCATGCATAA 1191 0.4005 MSHNNHITTDSPLSRRIVRSFLQFLNSVEPGPGVDAEGIEVARECLAEAFKLNSSGVDGDPQSDSLIDMFKSLEARKQRETIKSDPSPMDASSSFSDHNPSSFAQNHMKDQDWTQGTDIFAASKDELCGKFFASLEKNHYFRVNHDGTDDPMQLEKASCLFDNAFKEMEKSGSPVLNLKNLAESLKSLGNKAMQSKQYHDAIELYNCAIAVHEKSAVYYCNRAAAYTQLKKYDEAIQDCLRSIEIDPNYSKAYSRLGLVYYAQGNYSFAIDKGFRKALLLDPNNEAVKENIRVAEHKLREEQHHANHNQLSVILSDYYAFVHCNSQPTGATVGNSASTYYTSQVNLLGFSLLHVTRHPPKNMNMMIESPFNNKKLVGMMLHILSAACMCVFLAWHA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02324 396 MobiDBLite consensus disorder prediction 85 101 - -
Arst7g02324 396 Gene3D Tetratricopeptide repeat domain 177 313 IPR011990 GO:0005515
Arst7g02324 396 Pfam Tetratricopeptide repeat 216 249 IPR001440 GO:0005515
Arst7g02324 396 Gene3D Immunoglobulin FC, subunit C 1 76 - -
Arst7g02324 396 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 177 326 - -
Arst7g02324 396 FunFam Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 76 - -
Arst7g02324 396 Coils Coil 284 304 - -
Arst7g02324 396 SMART tpr_5 216 249 IPR019734 GO:0005515
Arst7g02324 396 SMART tpr_5 250 284 IPR019734 GO:0005515
Arst7g02324 396 SMART tpr_5 182 215 IPR019734 GO:0005515
Arst7g02324 396 MobiDBLite consensus disorder prediction 78 101 - -
Arst7g02324 396 ProSiteProfiles TPR repeat profile. 182 215 IPR019734 GO:0005515
Arst7g02324 396 PANTHER LD24721P 3 364 IPR047150 -
Arst7g02324 396 ProSiteProfiles TPR repeat profile. 216 249 IPR019734 GO:0005515
Arst7g02324 396 SUPERFAMILY TPR-like 181 295 IPR011990 GO:0005515
Arst7g02324 396 ProSiteProfiles TPR repeat profile. 250 284 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02324 Arst-Chr7 54719620 54729689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02324 181 280 U-box Gene Family AT3G07370 30.000 1.47e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02324 K16365 - gmx:100775346 440.654