Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02312 ATGGCTTCCGCAGAAATTGAGTACCGTTGCTTCGTTGGTGGGCTTGCCTGGGCCACCGACAACGAAGCCCTCGAGAAAGCCTTCTCTTCCTTTGGCGAGATCGTCGAATCGAAGGTTATCAATGATCGTGAGACTGGAAGGTCGAGGGGTTTCGGATTTGTAACCTTCGCCACAGAGCAGGCCATGAGGGATGCCATCGAGGGGATGAATGGCCAGAACCTTGATGGCCGTAACATCACTGTCAACGAGGCGCAGTCCCGCGGTCGGGGCGGTGGCGGCGGTGGCGGTTACGGTAGCGGTGGCGGTACGGTGGTAACGGTGGTAATGGTGGAGGTGGCTATGGAGGAGGTGGTTACGGTGGTGGGCGGGACCGTGGGTACGGAGACGGTGGATCTCGTTACTCAAAGGGGGGTGGTGCTTCTGATGGAAATTGGAGGAATTAG 443 0.5801 MASAEIEYRCFVGGLAWATDNEALEKAFSSFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGYGSGGGYGGGGYSRGGGGGGGYGGRREGGGGYNRGGGGGGYGGNGGNGGGGYGGGGYGGGRDRGYGDGGSRYSKGGGASDGNWRN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02312 181 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Arst7g02312 181 MobiDBLite consensus disorder prediction 147 181 - -
Arst7g02312 181 Gene3D - 2 120 IPR012677 -
Arst7g02312 181 FunFam Glycine-rich RNA-binding protein GRP1A 2 111 - -
Arst7g02312 181 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Arst7g02312 181 SMART rrm1_1 9 82 IPR000504 GO:0003723
Arst7g02312 181 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 6 162 - -
Arst7g02312 181 CDD RRM2_NsCP33_like 9 84 - -
Arst7g02312 181 SUPERFAMILY RNA-binding domain, RBD 9 117 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02312 Arst-Chr7 54327731 54329000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02312 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 5.00e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02312 - K13195 gmx:100777821 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02312 7 54327731 54329000 Arst7g02312 7 54327731 54329000 ECH