Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02304 ATGTTGCACTGTCTCAACAGTAACGCTTCGGGCTCCGAGATGACAGTGCTAGAAAGGCAAAGGGCAACGATCAAGTGGCAACACAACAACAATCATCACCAAGGATACTCCTCTTCTTCTTCACCTTCACCATCTTCATCTTCTTCAATCTCACTTGTTCAAGTTCAGAGCAGCTCTCCTACTTGCCTTGCTGCTGGAGCGTGGCCCAAACTCGACAACAACTTTCTCATGGGATTCACCTCTTCTCCTTCTTCTGGATTCCCGCTACCTCCTCCTCCTCCTCCTACAACTTCTGCTGCTTCTTTTGATCTAAATTCCGCAATCTCAAGGACTTCCAGCTGTCCACTGCCTTCTCTTGCAGAGGGGAAAGAGACTACTACTCCCAATAACAAGAGAAAAACTGACAAGTTTCACAACACCAAGGTTGTTGCTTCAGATAATGATAACAAGGACAAGAGGGTCAAAGTGGCTGCTCCCAATGACTCAGCAACCGTAGGCAAGAAAGGCACACAAGCTTGTGGAGATAATTCCAACAAGGATAATTCAAAAGTTTCTGAGGTTCAGAATCAGAAGCCAGATTACATTCATGTCCGAGCACGCCGGGGCCAAGCCACTGATAGCCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATCAGCGAGAGAATGAAGTTCTTGCAGGATTTAGTGCCCGGTTGCAACAAGATTACTGGAAAAGCTGGAATGCTTGATGAAATCATCAACTATGTCCAGTCCCTTCAACGACAAGTTGAGTTCTTGTCAATGAAATTAGCTGCTGTGAACCCAAGACTTGACTTCAACATGGATGATCTCTTTACCAGAGAGGTGTTTCCTGCATGTGCTGCAAGTTTTCCTGCTATAGAAATGTCACCAAACATGGCTAACACTGCCTCTTATCTTCACTTCAATTCATCACAACAAATAGATGCAGGGATAAACCCTCAAGATATCAGTCTCCGAAGGACCATTAGTGCCCCAGTATCCGCGCCAGAAACCTTTCTTGATTCGTCTTGTTTCACTCAAACTCTGCCCTCCTCAACTTGGGAAGGTGATTTTCAAAACCTTTACAGTGTGGCTTTTGATCAAGCAAGAGCAGCATCCTTTCCTTCTCAGCTATTCACAGGTCTACTTGAACCGAGCAATCTAAAGATGGAGATGGAGATGGAGATGTAG 1194 0.4506 MLHCLNSNASGSEMTVLERQRATIKWQHNNNHHQGYSSSSSPSPSSSSSISLVQVQSSSPTCLAAGAWPKLDNNFLMGFTSSPSSGFPLPPPPPPTTSAASFDLNSAISRTSSCPLPSLAEGKETTTPNNKRKTDKFHNTKVVASDNDNKDKRVKVAAPNDSATVGKKGTQACGDNSNKDNSKVSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNMDDLFTREVFPACAASFPAIEMSPNMANTASYLHFNSSQQIDAGINPQDISLRRTISAPVSAPETFLDSSCFTQTLPSSTWEGDFQNLYSVAFDQARAASFPSQLFTGLLEPSNLKMEMEMEM 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02304 397 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 201 272 IPR036638 GO:0046983
Arst7g02304 397 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 62 310 IPR024097 GO:0006355
Arst7g02304 397 FunFam Basic helix-loop-helix transcription factor 200 272 - -
Arst7g02304 397 MobiDBLite consensus disorder prediction 126 157 - -
Arst7g02304 397 MobiDBLite consensus disorder prediction 30 52 - -
Arst7g02304 397 Gene3D - 200 274 IPR036638 GO:0046983
Arst7g02304 397 MobiDBLite consensus disorder prediction 112 187 - -
Arst7g02304 397 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 253 IPR011598 GO:0046983
Arst7g02304 397 CDD bHLH_AtBPE_like 193 278 - -
Arst7g02304 397 Pfam Helix-loop-helix DNA-binding domain 207 254 IPR011598 GO:0046983
Arst7g02304 397 MobiDBLite consensus disorder prediction 164 187 - -
Arst7g02304 397 SMART finulus 209 259 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02304 Arst-Chr7 54006902 54009189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02304 13 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 38.360 1.81e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst7g02304 HLH 5.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02304 - - gmx:100798855 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02304 7 54006902 54009189 Arst7g02304 7 54006902 54009189 ECH
Arst7g02304 7 54006902 54009189 Arst5g00985 5 9530012 9531514 ECH