Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02287 ATGTGCGGCGACGCAACCAACTGGGACGAAAATGCGTACAGGGAGTGCCTCCTCAAGGGGAGGGAGATCCAAACCCAAACCGTTTTCCGTACGGCTTGGGCTCCTAGTCCCCGAAACCCTAATCCTCACTCTCTCGTCGTTGCTTCCAGCGACGGTTCTATCGCCTCCTACTCCATCCCTTCCTGCATCTCCAACCTCAAAAATAATACCGATGCCAATGCGGCTAGATTATTGGCTGAACCAGATTGCTTCTTTCAAGGGCATGATGGACCTACATATGATGTCAAATTCTATGGTGATGGTGAAGATGCACTGTTGTTAAGTTGTGGAGATGATGGGTGGATTCGAGGATGGAGGTGGAAGGAACTTGCAAACTCAAATAGTGCTGTTTCTTCTCAAGGAAACAATATCAAACCCATACTTGACCTGGCAAATCCTCAACACAAAGGTCCTTGGGGTGCACTTTCACCTATCCCTGAGAATAATGCTATTGCTGTTGATTCTCAGGGGGGATCTGTTTTCTCTGCTTCTGGTGATTCTTGTGCATATTGTTGGGATGTGGAAACTGGTAAAGTGAAAATGGTATTTAAGGGGCACTTGGACTACTTGCACTGCATAGTTGCTCGCAACTCATCCAATCAGATTATAACTGGTTCAGAGGACAGGACTGCACGAATTTGGGATTGCAAAAGTGGAAAGTGTATCAAAGTGATTGATCCAGTCAAAGATTTGAACTCAAAAGGATCTGTTTCATGGGTTGGCTGTGTTGCATTAGATGCAAGTGAGAGCTGGTTGGCTTGCAGTAGTGGACGGAATATATCCCTTTGGAACCTTCCTGCTTCAGAGTGCTTATCAAGGATTTCAACTTGTGCTTCTGTACAGGACATGCTATTTGACAGCAACCAAATTTTGGCAGTTGGTGCAGATCCTCTACTGAATCGCTTTGACATGAATGGTGCAATCCTTTCGCAAATACAGTGTGCTTCTGCATCAGCTTTCTCTGTCTCCTTACATCCTGCAGGGGTTGTGGCAGTTGGAGGTTATGGATGTCTTGTAGATGTTATCTCACAATTTGGTAGCCATATGTGCACATTCCATTGCAAGTGCATTGAGGCTATACCATTCTACGCGGACCAAAATGCCACAGATTTGTTGCTCCCAGCAAAAACATCTGAGATCCGAGGAGTTTGGGAAACCCTAACTCCGCTCGATCTTCTTCCACTGCAAACATCTTCGTCCTCTTCATCATCAACATCAATATCAACATCATCATCCGCAGTCATGGCAGGAGCTGCACCTGAGGGAACACAGTTCGATGCTCGTCAATTTGATGCAAAAATGAATGATTTACTCACAGCTGATGGACAGGACTTCTTCACATCTTATGATGAGGTGTACGATAGCTTTGATGCTATGGGTTTGCAAGAGAATCTCCTCAGAGGCATTTACGCCTATGGTTTTGAAAAGCCATCAGCTATTCAGCAAAGGGGAATAGTCCCATTTTGCAAGGGACTTGATGTTATTCAACAGGCCCAATCCGGAACTGGAAAAACTGCAACTTTCTGCTCTGGAATCCTGCAACAACTTGACTACAGCCTGACTGAATGTCAGGCCTTGGTTTTAGCGCCAACCCGTGAGCTTGCTCAGCAGATTGAGAAGGTTATGCGGGCGCTTGGAGATTATCTAGGTGTGAAGGTTCATGCCTGTGTGGGAGGCACCAGTGTTCGTGAAGACCAACGCATTCTAGCCAGCGGTGTTCATGTTGTTGTTGGTACTCCTGGACGTGTCTTTGATATGCTGCGCAGACAGTCACTTCAGCCGGATCACATTAAAATGTTTGTGTTGGATGAGGCCGATGAAATGCTTTCAAGGGGTTTTAAAGACCAGATCTACGATATATTCCAGTTGTTGCCATCGAAGATTCAGGTTGGAGTTTTCTCTGCCACAATGCCCCCTGAGGCCCTTGAAATTACTAGAAAGTTCATGAACAAACCTGTGAGGATCCTTGTGAAGCGGGACGAGCTCACTTTGGAGGGTATAAAGCAGTTTTATGTCAATTGTGAGAGAGAGGAATGGAAGCTCGACACACTTTGTGATCTGTACGAGACATTAGCCATTACCCAGAGTGTCATTTTTGTCAACACCAGAAGGAAGGTAGATTGGTTGACGGACAAGATGCGAAGCCGAGACCACACGGTGTCAGCCACCCACGGAGACATGGACCAGAATACGAGGGACATCATTATGCGGGAGTTCCGTTCTGGGTCTTCCCGTGTTCTGATAACAACTGATCTTCTGGCACGTGGTATTGATGTTCAGCAAGTGTCTCTCGTAATAAACTATGATCTCCCTACACAGCCCGAGAACTATCTCCACCGTATCGGTCGTAGTGGTCGGTTTGGTAGAAAGGGTGTTGCCATCAACTTTGTCACGAAGGATGATGAAAGAATGCTGTTTGACATCCAGAAGTTTTATAATGTGCAAATCGAGGAGCTGCCTGCAAATGTTGCTGAACTCCTCTGA 2523 0.4618 MCGDATNWDENAYRECLLKGREIQTQTVFRTAWAPSPRNPNPHSLVVASSDGSIASYSIPSCISNLKNNTDANAARLLAEPDCFFQGHDGPTYDVKFYGDGEDALLLSCGDDGWIRGWRWKELANSNSAVSSQGNNIKPILDLANPQHKGPWGALSPIPENNAIAVDSQGGSVFSASGDSCAYCWDVETGKVKMVFKGHLDYLHCIVARNSSNQIITGSEDRTARIWDCKSGKCIKVIDPVKDLNSKGSVSWVGCVALDASESWLACSSGRNISLWNLPASECLSRISTCASVQDMLFDSNQILAVGADPLLNRFDMNGAILSQIQCASASAFSVSLHPAGVVAVGGYGCLVDVISQFGSHMCTFHCKCIEAIPFYADQNATDLLLPAKTSEIRGVWETLTPLDLLPLQTSSSSSSSTSISTSSSAVMAGAAPEGTQFDARQFDAKMNDLLTADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLQPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNCEREEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVQIEELPANVAELL 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02287 840 SUPERFAMILY WD40 repeat-like 39 360 IPR036322 GO:0005515
Arst7g02287 840 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 196 228 - -
Arst7g02287 840 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 498 668 IPR014001 -
Arst7g02287 840 FunFam Eukaryotic initiation factor 4A-II 455 674 - -
Arst7g02287 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 536 821 IPR027417 -
Arst7g02287 840 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 614 622 IPR000629 -
Arst7g02287 840 Gene3D - 457 675 IPR027417 -
Arst7g02287 840 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 679 840 IPR001650 -
Arst7g02287 840 SMART ultradead3 486 683 IPR014001 -
Arst7g02287 840 CDD SF2_C_DEAD 680 810 - -
Arst7g02287 840 Gene3D - 150 431 IPR015943 GO:0005515
Arst7g02287 840 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 467 495 IPR014014 GO:0003724
Arst7g02287 840 Gene3D - 7 149 IPR015943 GO:0005515
Arst7g02287 840 Pfam WD domain, G-beta repeat 247 277 IPR001680 GO:0005515
Arst7g02287 840 Pfam WD domain, G-beta repeat 192 228 IPR001680 GO:0005515
Arst7g02287 840 SMART helicmild6 720 801 IPR001650 -
Arst7g02287 840 ProSiteProfiles Trp-Asp (WD) repeats profile. 196 237 IPR001680 GO:0005515
Arst7g02287 840 CDD DEADc_EIF4A 471 669 - -
Arst7g02287 840 SMART WD40_4 78 119 IPR001680 GO:0005515
Arst7g02287 840 SMART WD40_4 136 186 IPR001680 GO:0005515
Arst7g02287 840 SMART WD40_4 318 356 IPR001680 GO:0005515
Arst7g02287 840 SMART WD40_4 231 277 IPR001680 GO:0005515
Arst7g02287 840 SMART WD40_4 189 228 IPR001680 GO:0005515
Arst7g02287 840 Gene3D - 676 840 IPR027417 -
Arst7g02287 840 PANTHER THO COMPLEX SUBUNIT 6 HOMOLOG 1 368 IPR042626 -
Arst7g02287 840 FunFam Eukaryotic initiation factor 4A-III 675 840 - -
Arst7g02287 840 Pfam DEAD/DEAH box helicase 492 653 IPR011545 GO:0003676|GO:0005524
Arst7g02287 840 Pfam Helicase conserved C-terminal domain 693 801 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02287 Arst-Chr7 53480791 53490016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02287 428 840 Eukaryotic Initiation Factors Gene Family AT1G72730 88.164 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02287 K03257 - jre:109009115 1354.35