Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02274 ATGGACCCTAATGCCAAGTCGCCCATAATTGTTTTGTCGCCATTCCCCTTTCCCTTTATTAGCTCCAATACCAATCTCAATTGTACAAACAGACAAGCAACAGCGTTGGATAGAGAGATGAAGATCCAATGTGATGCGTGTGACAAAGACGAGGCATCTCTATTCTGTCCTGCAGATGAAGCCGCTCTCTGCCATGCCTGTGACCTTACAATCCACCATGCTAACAAGCTCGCAATCAAGCACACGCGCTTCACTCTCCACCAGCCTTCCTCCAAAGACACCCCTCGCTGCGATATCTGCCAAGAAAGGCGTGCATATCTGTTTTGCAAAGAAGACAGAGCAATACTTTGCAGAGAATGCGATGTTCCTATCCACAAAGCCAACGAACACACGCAGAACCATAGCAGGTTCCTTCTCACTGGTGTGAAGCTCTCTGGTTCCTCTCTCGACACGGCTTCATCATCATCAGTCACCAGCTCAACTGAGGCAAGAAGCTCCCGTTCAAGAATGAAGAGACCCACTGCTTTCAATAATGAGCACAATATGTCTGCGGCTACTACTAGTAATAGTGACACCGGTTCGGCTTCCTCAAGCAGCATATCCAAATTCTTGATTGAAACCATTCCCGGTTACTGCTTCGAAGACCTTCTCGATGCTTCCTTTCCACATAATAATGGTTTCTGTAAGAATCAACATTTAATGTCAGTGACAATATGTGGTTATTATTTTCAACTTGGATTGTTTCCCAGATCAGTTCTGTAG 762 0.4567 MDPNAKSPIIVLSPFPFPFISSNTNLNCTNRQATALDREMKIQCDACDKDEASLFCPADEAALCHACDLTIHHANKLAIKHTRFTLHQPSSKDTPRCDICQERRAYLFCKEDRAILCRECDVPIHKANEHTQNHSRFLLTGVKLSGSSLDTASSSSVTSSTEARSSRSRMKRPTAFNNEHNMSAATTSNSDTGSASSSSISKFLIETIPGYCFEDLLDASFPHNNGFCKNQHLMSVTICGYYFQLGLFPRSVL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02274 253 SMART bboxneu5 39 86 IPR000315 GO:0008270
Arst7g02274 253 SMART bboxneu5 92 139 IPR000315 GO:0008270
Arst7g02274 253 Gene3D Classic Zinc Finger 40 136 - -
Arst7g02274 253 Pfam B-box zinc finger 94 131 IPR000315 GO:0008270
Arst7g02274 253 Pfam B-box zinc finger 42 83 IPR000315 GO:0008270
Arst7g02274 253 FunFam B-box zinc finger protein 21 40 137 - -
Arst7g02274 253 ProSiteProfiles Zinc finger B-box type profile. 39 86 IPR000315 GO:0008270
Arst7g02274 253 CDD Bbox1_BBX-like 97 139 - -
Arst7g02274 253 CDD Bbox1_BBX-like 44 86 - -
Arst7g02274 253 ProSiteProfiles Zinc finger B-box type profile. 92 139 IPR000315 GO:0008270
Arst7g02274 253 PANTHER B-BOX ZINC FINGER PROTEIN 22 40 229 - -
Arst7g02274 253 MobiDBLite consensus disorder prediction 147 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02274 Arst-Chr7 52667252 52668869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02274 40 229 C2C2-CO-like Transcription Factor Family AT1G75540 46.890 6.77e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Arst7g02274 zf-B_box 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02274 - - adu:107458960 469.929