Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02250 ATGATCTCCTCCAGCTCATGCTCCTTCCTGAGCAACTCAGCTGTAGCTGGGTCTCGCAGCTTCTGTGGTGGTGCGAGGAAGGGTCATTCGAGTCCTTTCAGGGTGGTGTGTTTGGCTCCAAGCAATGACAGGAACGGAAGCGTTGTGTTAGATTCTCCCGCGAAGAAAGAGCAGATAAGAAATGAACCAACATCGCCGCCTGCTGAAGAGGAAACAGTCTCTTCCGGTGGCCCTCAGGATGTCTACGGCGAGGATAAGGCCACGGAGGATCAGTTTGTTACCCCCTGGAATGTCTCTGTTGCTAGCGGTTATACATTGTTGCGAGATCCCCACTTCAATAAAGGGTTGGCCTTCACTGAGAAGGAGAGGGATGCTCACTACTTGCGAGGTCTTCTTCCCCCGACAGTTATTCCGCAGGAAACTCAGGTGAAGAAAATGATCCAGCACGTTCGTCAGTATCAAGTTCCATTGCAGAAGTACATGGCAATGATGGATCTTCAGGAGAGGAATGAACGGTTGTTTTATAAGCTTCTTATTGAGCACGTCGAAGAGTTACTCCCAGTTGTCTATACTCCAACTGTTGGTGAAGCTTGCCAGAAATACGGAAGCATCTTTATGCGTCCTCAGGGTCTTTATATCAGCTTGAAAGAGAAGGGGAGGATTCTTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGATGGAGAACGGATCTTGGGTCTTGGGGATCTTGGTTGTCAGGGAATGGGAATACCAGTTGGAAAACTTTCTTTATATACAGCACTCGGAGGAGTTCGTCCGTCTGCCTGTTTGCCTATCACCATTGATGTGGGAACAAACAACGAGAACTTGTTGAATGATGAGTTATATATAGGGCTCAAGCAAAGACGGGCGACTGGGCAGGAATATGCTGAACTTATGCATGAATTTATGAGTGCTGTCAAGCAAAATTACGGGGAGAAAGTCCTCATTCAGTTTGAAGACTTTGCGAACCACAACGCATTTGATCTACTTGAAAAATATAGATCAACCCATCTTGTTTTCAATGATGATATTCAAGGTACAGCATCAGTCGTCCTTGCTGGACTAGTTGCAGCTCTGAAATTGGTTGGGGGCAACTTGGCTGACCACAGATTCTTGTTCCTTGGTGCTGGAGAGGCTGGCACTGGAATTGCAGAACTTATTGCACTTGAAACATCAAAACAGACTAATGCCCCACTAGATGAAGTGCGCAAGAACATTTGGTTGGTGGACTCAAAGGGATTGATTGTCAGTTCCCGAAAAGAATCGCTTCAACATTTTAAGAAGCCATGGGCCCATGATCACGAACCCGTTCATCGACTCGTAGATGCTGTTAATAAAATCAAACCAACAGTGTTGATTGGAACCTCTGGACAAGGAAGAACTTTCACTAAAGAAGTTATTGAGGCAATGGCTTCAATCAATGAGAAACCTATCATTCTTTCACTTTCCAACCCAACTTCACAATCAGAATGTACTGCTGAAGAGGCTTACAAGTGGAGCCAGGGCCGCGCCATTTTCGCTAGCGGAAGCCCATTCCCTCCGGTTGAGTATGAAGGAAAAGCTTTTGTGCCTGGCCAGGCCAATAATGCATACATATTCCCCGGATTCGGTCTTGGTTTAATAATGTCCGGTACCATTCGGGTCCACGACGACCTCCTTCTCGCCGCATCGGAGGCTTTGGCTGCACAAGTGAGTGAAGAGAACTTTGAGAAAGGACTGATATACCCTCCATTCACCAACATCAGAAAGATTTCAGCACACATTGCTGCCAGTGTTGCTGCTAAGGCTTATGAGCTTGGGTTGGCCACTCGCCTTCCACAACCCAAGGATTTGGTTAAGTTTGCTGAGAGCTGTATGTACACCCCAGCCTACAGAAGCTACCGACAACAGGAATGA 1938 0.4665 MISSSSCSFLSNSAVAGSRSFCGGARKGHSSPFRVVCLAPSNDRNGSVVLDSPAKKEQIRNEPTSPPAEEETVSSGGPQDVYGEDKATEDQFVTPWNVSVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPTVIPQETQVKKMIQHVRQYQVPLQKYMAMMDLQERNERLFYKLLIEHVEELLPVVYTPTVGEACQKYGSIFMRPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNENLLNDELYIGLKQRRATGQEYAELMHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHRFLFLGAGEAGTGIAELIALETSKQTNAPLDEVRKNIWLVDSKGLIVSSRKESLQHFKKPWAHDHEPVHRLVDAVNKIKPTVLIGTSGQGRTFTKEVIEAMASINEKPIILSLSNPTSQSECTAEEAYKWSQGRAIFASGSPFPPVEYEGKAFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAAQVSEENFEKGLIYPPFTNIRKISAHIAASVAAKAYELGLATRLPQPKDLVKFAESCMYTPAYRSYRQQE 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02250 645 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 83 357 IPR046346 -
Arst7g02250 645 PRINTS Malic enzyme signature 488 504 IPR001891 GO:0004470|GO:0004471
Arst7g02250 645 PRINTS Malic enzyme signature 269 291 IPR001891 GO:0004470|GO:0004471
Arst7g02250 645 PRINTS Malic enzyme signature 173 197 IPR001891 GO:0004470|GO:0004471
Arst7g02250 645 PRINTS Malic enzyme signature 385 401 IPR001891 GO:0004470|GO:0004471
Arst7g02250 645 PRINTS Malic enzyme signature 329 347 IPR001891 GO:0004470|GO:0004471
Arst7g02250 645 PRINTS Malic enzyme signature 354 370 IPR001891 GO:0004470|GO:0004471
Arst7g02250 645 PRINTS Malic enzyme signature 233 262 IPR001891 GO:0004470|GO:0004471
Arst7g02250 645 FunFam Malic enzyme 356 642 - -
Arst7g02250 645 CDD NAD_bind_1_malic_enz 358 636 - -
Arst7g02250 645 Gene3D - 101 355 IPR037062 GO:0004471
Arst7g02250 645 Gene3D - 356 645 - -
Arst7g02250 645 Pfam Malic enzyme, N-terminal domain 167 348 IPR012301 GO:0004471
Arst7g02250 645 FunFam Malic enzyme 101 355 - -
Arst7g02250 645 PANTHER MALIC ENZYME-RELATED 70 642 - -
Arst7g02250 645 PANTHER MALIC ENZYME-RELATED 70 642 - -
Arst7g02250 645 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 358 642 IPR036291 -
Arst7g02250 645 SMART malic_2 167 348 IPR012301 GO:0004471
Arst7g02250 645 ProSitePatterns Malic enzymes signature. 354 370 IPR015884 GO:0004471
Arst7g02250 645 Pfam Malic enzyme, NAD binding domain 358 610 IPR012302 GO:0051287
Arst7g02250 645 SMART Malic_M_2 358 611 IPR012302 GO:0051287
Arst7g02250 645 PIRSF ME 65 644 IPR001891 GO:0004470|GO:0004471
Arst7g02250 645 MobiDBLite consensus disorder prediction 46 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02250 Arst-Chr7 51807692 51813601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02250 K00029 - gmx:100791514 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00409 9 3328122 3335028 Arst7g02250 7 51807692 51813601 ECH
Arst5g03134 5 88366321 88371688 Arst7g02250 7 51807692 51813601 ECH
Arst8g01170 8 16213667 16218449 Arst7g02250 7 51807692 51813601 ECH
Arst7g02250 7 51807692 51813601 Arst7g02250 7 51807692 51813601 ECH
Arst7g02250 7 51807692 51813601 Arst8g01170 8 16213667 16218449 ECH
Arst7g02250 7 51807692 51813601 Arst9g00409 9 3328122 3335028 PCT