Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02249 ATGACTCGGCGGTGCTCACACTGTAGCAACAACGGCCACAATTCCAGGACATGCCCCAACCGCGGCGGCGGCGGAGTGAAGCTGTTCGGTGTGAGGCTGACGGATGGATCAATCATAAAGAAGAGTGCGAGTATGGGGAATCTGATGACGCTTCACCACCATTGTTCGTCTCCTTCTTCCTCGTTTGTGGCCACCGCCGGCGATAACCCAGGCTCGCCTGATCCCGTTGGTTACTTGTCCGACGACCCTGCCCACGCCTCGTCCTTCGCCAACCGCCGTGGCGAAAGAAAGAAAGGTGTTCCATGGACTGAAGAAGAACATCGGATGTTCTTAGTTGGTCTGCAAAAGCTGGGGAAAGGAGATTGGCGTGGAATATCACGTAATTTTGTTGTATCAAGAACCCCTACTCAAGTAGCAAGTCATGCCCAGAAGTATTTTATCCGACAGAGTAATGCTACCCGGAGAAAGAGGCGTTCCAGCCTCTTTGACATGGCTCCAGATATGCCTACGGAACCGCCTTCGGTGCTGGAAAAACAAGTACTGCTTCTGACCTCTGAGAACTCACAATCTCCCAATGTAAAATCACAACCTTCATTAAATCTATCTCTCAAATCTGAAGTTGACCCCATGGAAATTGCTTCTGAGGAAAATGTGAAAGAGAACAATGTAGCTAATGGGTTGAAAACAAAGGCTCCTGAATACTTCCCAACTTATGTACCTGTCCAATTTTCCATATGGCCATCACTGGAAGCTTCCTTTCAAGAAAGTAATGGAGTAGAGACATCTCATCATGAGGTTGTAAAGCCAATTCCAGTCGTTCCCAAGAATCCGGTCAATGTTGATGCACTTGTGGGAATGTCTAATCTGAGCATTGGAAACACACAGATGATTCTTAAAAGGGAGCCTTCCCCACTTTCCCTGAAATTGTTAACCTAAGCAGTGGCAAGAACAATCCAATCCAAGCTGTTTGA 971 0.4768 MTRRCSHCSNNGHNSRTCPNRGGGGVKLFGVRLTDGSIIKKSASMGNLMTLHHHCSSPSSSFVATAGDNPGSPDPVGYLSDDPAHASSFANRRGERKKGVPWTEEEHRMFLVGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMAPDMPTEPPSVLEKQVLLLTSENSQSPNVKSQPSLNLSLKSEVDPMEIASEENVKENNVANGLKTKAPEYFPTYVPVQFSIWPSLEASFQESNGVETSHHEVVKPIPVVPKNPVNVDALVGMSNLSIGNTQMILKREPSPLSLKLLGEPSRQSAFHANTHAPVGRSDLSSGKNNPIQAV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02249 343 CDD SANT 101 146 IPR001005 -
Arst7g02249 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 150 IPR017930 -
Arst7g02249 343 Gene3D - 100 151 - -
Arst7g02249 343 MobiDBLite consensus disorder prediction 324 343 - -
Arst7g02249 343 NCBIfam myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Arst7g02249 343 SMART sant 98 148 IPR001005 -
Arst7g02249 343 ProSiteProfiles Myb-like domain profile. 94 146 IPR001005 -
Arst7g02249 343 MobiDBLite consensus disorder prediction 1 21 - -
Arst7g02249 343 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
Arst7g02249 343 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Arst7g02249 343 PANTHER TRANSCRIPTION FACTOR KUA1 3 273 - -
Arst7g02249 343 MobiDBLite consensus disorder prediction 1 18 - -
Arst7g02249 343 MobiDBLite consensus disorder prediction 59 99 - -
Arst7g02249 343 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Arst7g02249 343 FunFam transcription factor MYB1R1 100 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02249 Arst-Chr7 51800331 51803194 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst7g02249 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02249 - - gmx:778036 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02249 7 51800331 51803194 Arst7g02249 7 51800331 51803194 ECH