Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02242 ATGTCTCTGCCTTCATTTGTTATGGTTATCTACTCTTCCTTCCACTTTCTGACCCTCTTTCTGAACAGAACTGCTCCAGGTCCAGTAGTGGGTTGGCCTCCAATCCGTTCATTCAGGAAGAACCTTGCAAATAGCAGCAGCTCTTCAAAGCCACCTCCTCCTCCTCCTGAGCACCATAGCAAGGTGGTGGTTGGTGGAAAAGGCATGTTTGTCAAGATCAACATGGATGGTGTTCCCATTGGTAGAAAAGTTGACCTCAATGCTTACGATAGCTATGAAAATCTCTCCAATGCTGTGGACCAACTCTTCAAAGGCCTTCTTGCTGCTCAAAGAGATTCCTCTGGTGGTGGAGTTAACAAGCTACAAGAGGAAGAGAAAGTGATAACAGGTTTATTAGATGGAAGTGGAGAGTATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTCGTATCAACAGTGAAGAGGCTGCGAGTCTTGAAGAGTTCTGAGCTTTCTGCCTTTACCCTTGGTGGTAAGCAAGACAAAGATGCAACTTGA 570 0.4544 MSLPSFVMVIYSSFHFLTLFLNRTAPGPVVGWPPIRSFRKNLANSSSSSKPPPPPPEHHSKVVVGGKGMFVKINMDGVPIGRKVDLNAYDSYENLSNAVDQLFKGLLAAQRDSSGGGVNKLQEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGGKQDKDAT 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02242 189 Pfam AUX/IAA family 23 177 IPR033389 -
Arst7g02242 189 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 27 175 IPR003311 GO:0005634|GO:0006355
Arst7g02242 189 ProSiteProfiles PB1 domain profile. 68 172 IPR000270 GO:0005515
Arst7g02242 189 FunFam Auxin-responsive protein 64 184 - -
Arst7g02242 189 SUPERFAMILY CAD & PB1 domains 65 169 - -
Arst7g02242 189 Gene3D - 64 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02242 Arst-Chr7 51721111 51722684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02242 71 183 B3 DNA Binding Superfamily AT4G23980 33.628 2.52e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst7g02242 AUX_IAA 1.6e-64 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02242 K14484 - gmx:100804593 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00420 9 3423079 3429557 Arst7g02242 7 51721111 51722684 ECH
Arst7g02242 7 51721111 51722684 Arst7g02242 7 51721111 51722684 ECH
Arst7g02242 7 51721111 51722684 Arst9g00420 9 3423079 3429557 PCT