Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02214 ATGACCACCGTACCGGGACAGCTGGTTTGGGAGATCGTGAAGAAGAACAACTGTTTCTTGGTTAAGGAGTTTGGAAGGGGCACTCAGAGCGTTGAGTTCAGCAGAGAAGCCAACAATCTCTACAACCTTAACTCCTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACTATTCAGCCTGCTGGAAAAGATCAGGCTGTGTTGCTTGCTACAACAAAGACAAAGAAGCAAAACAAGCCGGCTGCATTGCTTCATAAATCTATCATGAAGAAGGAGTTCCCTAGAATGGCAAAAGCAGTGAAAAAACAGGTTGCAGCTAACTACTACAGGCCTGATCTCACCAAGGCAGCTCTTGCAAGGTTGAGTGCTGTCAATAGGAGCCTCAGGGTTGCAAAGTCTGGTGTCAAGAAGAGAAACAGACAGGCTGTTAAGGTCCATGGCAGGAAGTGA 453 0.4614 MTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREANNLYNLNSFKYSGLANKKTVTIQPAGKDQAVLLATTKTKKQNKPAALLHKSIMKKEFPRMAKAVKKQVAANYYRPDLTKAALARLSAVNRSLRVAKSGVKKRNRQAVKVHGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02214 150 Gene3D - 6 133 - -
Arst7g02214 150 FunFam 60S ribosomal protein L28 5 133 - -
Arst7g02214 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Arst7g02214 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02214 Arst-Chr7 51485765 51487244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02214 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.825 5.96e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02214 K02903 - gmx:100499921 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00526 9 4454149 4457020 Arst7g02214 7 51485765 51487244 ECH
Arst7g02214 7 51485765 51487244 Arst7g02214 7 51485765 51487244 ECH
Arst7g02214 7 51485765 51487244 Arst9g00526 9 4454149 4457020 PCT