Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02162 ATGATGGCAGGTAGTGGACAACTAACAGTTCCACCAGGGTTCCGGTTCCATCCAACTGATGAGGAGCTTCTCTACTATTACCTAAGGAAGAAAGTTTCTTATGAAGCCATTGACCTTGATGTCATTAGAGAGGTTGATCTCAACAAACTTGAACCTTGGGACCTCAAAGATAAATGCAGAATAGGATCAGGGCCTCAGAACGAGTGGTATTTCTTCAGTCACAAAGACAAGAAGTACCCAACAGGAACAAGGACCAATAGGGCAACCACTGCTGGTTTCTGGAAAGCCACTGGGAGGGACAAGGCCATATACCATACTAGCAATTCCAAGAGGATCGGGATGAGAAAAACCCTAGTTTTCTACACCGGCCGTGCGCCCCACGGCCAGAAGACTGACTGGATCATGCATGAGTACCGCCTCGACGAAGACGAGGCCGAGGTTCAGGAGGATGGGTGGGTCGTGTGCAGGGTTTTCAAGAAGAAAAACCAAAGCAGAGGGTTTCAACAAGAAATTGAAGAAGAGGAACATCATCACTTAGCAGCAGCACATCAACACATGAGAGGAGTAGCAAGCCAACAAGTTCTGGACCCAAAACACCACCACCACTTGCAACATCATCAAGGACTCTATGATAATGAAAATAATAATAATTACACCAATAATTTTGATGGATCCATGCATCTTCCACAGTTGTTCAGTCCAGAATCTTCCGTGGCTACCGCGGCGGCGCACACTTCCATGAATGCCATGGACATTCTTGAATGCTCCCAGAACCTTCTAAGGCTCACAACAACAAGTGGATGTGGACTCAATCTCATGCAACAACAACATGGAGAGAGGTTCAATGGTGATTGGTCTTTCTTGGATAAGCTTCTTGCTTCACACCATGGCAGCACCATGGATCATCATCAGCATCATCATCATCATAGCAAATGTAACAATAATCTTCATCATCAGCATTCTGCAATTGCTATTGGAACTACTTCATCTCAGAAATTCCCATTTCACCACCTTGGTTGTGACAACCATGATATCATGAAGTTTTCCAAGTAG 1053 0.4511 MMAGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDEAEVQEDGWVVCRVFKKKNQSRGFQQEIEEEEHHHLAAAHQHMRGVASQQVLDPKHHHHLQHHQGLYDNENNNNYTNNFDGSMHLPQLFSPESSVATAAAHTSMNAMDILECSQNLLRLTTTSGCGLNLMQQQHGERFNGDWSFLDKLLASHHGSTMDHHQHHHHHSKCNNNLHHQHSAIAIGTTSSQKFPFHHLGCDNHDIMKFSK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02162 350 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Arst7g02162 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 236 - -
Arst7g02162 350 Pfam No apical meristem (NAM) protein 11 140 IPR003441 GO:0003677|GO:0006355
Arst7g02162 350 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
Arst7g02162 350 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Arst7g02162 350 FunFam NAC domain-containing protein 19 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02162 Arst-Chr7 49509996 49513765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02162 2 350 NAC Transcription Factor Family AT1G79580 56.728 3.61e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst7g02162 NAM 1.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02162 - - gmx:100789606 501.13